Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small ribosomal subunit

Term: GO:0015935  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene148755 SustainPine v3.0 269
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.55e-07
Putative N-terminus
sp_v3.0_unigene149411 SustainPine v3.0 320
• AutoFact: Putative ribosomal protein L8e (Fragment) n=1 Tax=Amblyomma variegatum RepID=F0J8L8_AMBVA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 2.922e-08
Putative N-terminus
sp_v3.0_unigene149740 SustainPine v3.0 207
• AutoFact: ribosomal protein S2 [Coprinopsis cinerea okayama7#130] gb|EAU91621.1| ribosomal protein S2 [Coprinopsis cinerea okayama7#130] 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.709e-19
Internal
sp_v3.0_unigene149747 SustainPine v3.0 344
• AutoFact: 40S ribosomal protein S5 n=2 Tax=Pucciniales RepID=E3K755_PUCGT 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 6.618e-22
C-terminus
sp_v3.0_unigene149881 SustainPine v3.0 345
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 8.0e-06
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 5.523e-08
Putative C-terminus
sp_v3.0_unigene150095 SustainPine v3.0 420
• AutoFact: 40S ribosomal protein S33 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WB00_9STRA 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 7.117e-11
Putative C-terminus
sp_v3.0_unigene150146 SustainPine v3.0 376
• AutoFact: 30S ribosomal protein S12 n=12 Tax=Alphaproteobacteria RepID=RS12_CAUSK 0.0
• FL-Next: sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S12, chloroplastic 0.0
Complete
sp_v3.0_unigene150184 SustainPine v3.0 175
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Ciona intestinalis RepID=RS23_CIOIN 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.718e-10
Internal
sp_v3.0_unigene150224 SustainPine v3.0 378
• AutoFact: [J] COG0098 Ribosomal protein S5 3.0e-20
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.554e-15
C-terminus
sp_v3.0_unigene150258 SustainPine v3.0 312
• AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S5, chloroplastic 1.586e-31
Putative C-terminus
sp_v3.0_unigene150285 SustainPine v3.0 421
• AutoFact: ribosomal protein S9 [Lysiphlebus testaceipes] gb|AAX62466.1| ribosomal protein S9 variant 1 [Lysiphlebus testaceipes] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.94273e-44
C-terminus
sp_v3.0_unigene150300 SustainPine v3.0 255
• AutoFact: Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RTY5_OSTLU 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.267e-14
C-terminus
sp_v3.0_unigene150354 SustainPine v3.0 278
• AutoFact: PREDICTED: similar to ribosomal protein S15e [Tribolium castaneum] gb|EEZ98503.1| hypothetical protein TcasGA2_TC001004 [Tribolium castaneum] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 1.124e-10
Putative C-terminus
sp_v3.0_unigene150374 SustainPine v3.0 112
• AutoFact: Ribosomal protein S23, putative n=2 Tax=Sarcocystidae RepID=B9PHL8_TOXGO 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 2.507e-07
Putative C-terminus
sp_v3.0_unigene150421 SustainPine v3.0 259
• AutoFact: Ribosomal protein S20 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01D50_OSTTA 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.148e-14
C-terminus
sp_v3.0_unigene150474 SustainPine v3.0 254
• AutoFact: Ribosomal protein 3 small subunit (Fragment) n=1 Tax=Suberites fuscus RepID=Q2N156_9METZ 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 2.695e-07
Internal
sp_v3.0_unigene150610 SustainPine v3.0 260
• AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 9.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.267e-14
Putative C-terminus
sp_v3.0_unigene150651 SustainPine v3.0 343
• AutoFact: Putative ribosomal protein S20 n=1 Tax=Barentsia elongata RepID=A8UAG4_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Putative Complete
sp_v3.0_unigene150654 SustainPine v3.0 437
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Trichinella spiralis RepID=E5S4A3_TRISP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.691e-10
Putative Complete
sp_v3.0_unigene150766 SustainPine v3.0 184
• AutoFact: Ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit n=3 Tax=Chlamydomonadales RepID=A8JGF8_CHLRE 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 5.121e-38
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain