Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene196448 SustainPine v3.0 410
• AutoFact: DUF1421 multi-domain protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene197923 SustainPine v3.0 241
• AutoFact: Pentatricopeptide repeat protein 91 n=3 Tax=Funariaceae RepID=F5CAE1_FUNHY 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene197949 SustainPine v3.0 195
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative uncharacterized protein At2g27790 3.52e-10
N-terminus
sp_v3.0_unigene198610 SustainPine v3.0 372
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.422e-11
N-terminus
sp_v3.0_unigene198904 SustainPine v3.0 469
• AutoFact: Unassigned protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene199877 SustainPine v3.0 815
• AutoFact: PREDICTED: alternative splicing factor SRp20/9G8, putative-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBF9B 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene200150 SustainPine v3.0 474
• AutoFact: ribosome biogenesis protein BMS1 homolog [Danio rerio] 3.0e-30
• FL-Next: tr=Uncharacterized protein; Phytophthora ramorum (Sudden oak death agent). 0.0
Internal
sp_v3.0_unigene200368 SustainPine v3.0 438
• AutoFact: Spliceosome associated protein, putative n=1 Tax=Ricinus communis RepID=B9RRM5_RICCO 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative spliceosome associated protein 1.147e-08
Putative N-terminus
sp_v3.0_unigene200732 SustainPine v3.0 736
• AutoFact: Unassigned protein 8.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene201890 SustainPine v3.0 482
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene201923 SustainPine v3.0 885
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.093e-28
Internal
sp_v3.0_unigene202139 SustainPine v3.0 993
• AutoFact: Os03g0569900 protein (Fragment) n=5 Tax=Oryza sativa RepID=Q0DQQ8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear acid binding protein, putative 1.212e-22
C-terminus
sp_v3.0_unigene202194 SustainPine v3.0 409
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 2.319e-07
Internal
sp_v3.0_unigene202336 SustainPine v3.0 743
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 3.404e-11
Putative C-terminus
sp_v3.0_unigene202801 SustainPine v3.0 531
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.922e-09
Complete
sp_v3.0_unigene202821 SustainPine v3.0 516
• AutoFact: 60S ribosomal protein L25 n=4 Tax=Pleosporineae RepID=B2VU63_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.642e-10
Complete
sp_v3.0_unigene202972 SustainPine v3.0 487
• AutoFact: rve domain containing protein 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene203081 SustainPine v3.0 396
• AutoFact: 40S ribosomal protein S24 n=2 Tax=Picea sitchensis RepID=A9NKN3_PICSI 3.0e-40
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
N-terminus
sp_v3.0_unigene203093 SustainPine v3.0 479
• AutoFact: ATP synthase subunit beta n=1 Tax=Polytomella sp. Pringsheim 198.80 RepID=A0ZW41_9CHLO 6.02558e-44
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta, chloroplastic 1.255e-28
Putative C-terminus
sp_v3.0_unigene203448 SustainPine v3.0 480
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.614e-27
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain