Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene166760 SustainPine v3.0 263
• AutoFact: RNA-binding protein [Brassica juncea] 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heterogeneous nuclear ribonucleoprotein 27C 1.777e-09
Internal
sp_v3.0_unigene166783 SustainPine v3.0 284
• AutoFact: 60S ribosomal protein L25 n=4 Tax=Pleosporineae RepID=B2VU63_PYRTR 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene166793 SustainPine v3.0 133
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AAK76494.1| putative helicase [Arabidopsis thaliana] gb|AAM15033.1| putative helicase [Arabidopsis thaliana] gb|AAD17447.2| putative helicase [Arabidopsis thaliana] gb|AAM14300.1| putative helicase [A 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167028 SustainPine v3.0 232
• AutoFact: putative strictosidine synthase [Oryza sativa Japonica Group] gb|ABF98899.1| Strictosidine synthase family protein, expressed [Oryza sativa Japonica Group] gb|EAY91875.1| hypothetical protein OsI_13523 [Oryza sativa Indica Group] 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative strictosidine synthase 5.639e-16
Internal
sp_v3.0_unigene167043 SustainPine v3.0 215
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene167062 SustainPine v3.0 285
• AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167129 SustainPine v3.0 256
• AutoFact: Chaperone protein dnaJ, putative n=2 Tax=fabids RepID=B9RQ46_RICCO 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DnaJ-like protein 1.034e-13
Putative N-terminus
sp_v3.0_unigene167195 SustainPine v3.0 293
• AutoFact: zinc finger CCCH domain-containing protein 46 [Arabidopsis thaliana] ref|NP_001030840.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis thaliana] sp|Q9SV09.1|C3H46_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 46; Short=AtC3H4 7.0e-18
• FL-Next: sp=Zinc finger CCCH domain-containing protein 46; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene167218 SustainPine v3.0 188
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.31e-06
C-terminus
sp_v3.0_unigene167492 SustainPine v3.0 361
• AutoFact: splicing factor [Arabidopsis thaliana] 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene167669 SustainPine v3.0 175
• AutoFact: putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] sp|Q9SKJ7.1|PT225_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At2g25520 gb|AAD20711.1| putative phosphate/phosphoenolpyruvate translocator protein [ 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 1.451e-11
Putative N-terminus
sp_v3.0_unigene167678 SustainPine v3.0 160
unknown
sp_v3.0_unigene167701 SustainPine v3.0 241
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene168038 SustainPine v3.0 353
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.503e-15
Internal
sp_v3.0_unigene168128 SustainPine v3.0 256
• AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 5.061e-11
Internal
sp_v3.0_unigene168338 SustainPine v3.0 236
• AutoFact: RNA recognition motif-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4IJ76_ARATH 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Arginine/serine-rich splicing factor RSP41 1.648e-16
Internal
sp_v3.0_unigene168693 SustainPine v3.0 335
• AutoFact: FAP multi-domain protein 2.0e-16
• Sma3: Glycine-rich protein 2.012e-11
coding
sp_v3.0_unigene169019 SustainPine v3.0 271
• AutoFact: Gly_rich multi-domain protein 7.0e-17
• Sma3: Glycine-rich RNA-binding protein 2.56e-14
coding
sp_v3.0_unigene169684 SustainPine v3.0 327
• AutoFact: GRP multi-domain protein 3.0e-16
• Sma3: Glycine-rich protein 2.897e-16
coding
sp_v3.0_unigene169876 SustainPine v3.0 524
• AutoFact: regulatory subunit of protein kinase A [Colletotrichum gloeosporioides] 3.0e-21
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain