Sustainpine_db
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Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158226 SustainPine v3.0 256
• AutoFact: pre-mRNA branch site protein p14 [Arabidopsis thaliana] ref|XP_002873554.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] sp|Q9FMP4.1|PM14_ARATH RecName: Full=Pre-mRNA branch site p14-like protein dbj|BAB10037.1| unnamed prot 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA branch site p14-like protein 6.096e-09
C-terminus
sp_v3.0_unigene158455 SustainPine v3.0 333
• AutoFact: PREDICTED: similar to ribosomal protein L23a n=1 Tax=Ciona intestinalis RepID=UPI00006A76DE 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene158538 SustainPine v3.0 492
• AutoFact: PremRNAsplicing factor 38B putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WLM7_9STRA 2.0e-14
• FL-Next: tr=PremRNAsplicing factor 38B putative; Albugo laibachii Nc14. 0.0
Internal
sp_v3.0_unigene158584 SustainPine v3.0 509
• AutoFact: Ribosomal protein S2 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C019_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 2.512e-19
N-terminus
sp_v3.0_unigene158787 SustainPine v3.0 392
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 1.992e-10
N-terminus
sp_v3.0_unigene159015 SustainPine v3.0 290
• AutoFact: 60S ribosomal protein n=1 Tax=Aureococcus anophagefferens RepID=F0YN25_9STRA 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.762e-10
C-terminus
sp_v3.0_unigene159093 SustainPine v3.0 526
• AutoFact: GDP-mannose-3'',5''-epimerase n=1 Tax=Oryza sativa Japonica Group RepID=Q3MU86_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GDP-mannose 3,5-epimerase 4.296e-09
Putative C-terminus
sp_v3.0_unigene159102 SustainPine v3.0 265
• AutoFact: glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40] ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus flavus NRRL3357] dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40] gb|EED53406.1| heterogen 1.0e-21
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 7.776e-30
N-terminus
sp_v3.0_unigene159138 SustainPine v3.0 333
• AutoFact: Ribosomal protein L23a n=2 Tax=Chlamydomonadales RepID=A8J239_CHLRE 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
Putative C-terminus
sp_v3.0_unigene159237 SustainPine v3.0 335
• AutoFact: ribosomal biogenesis protein Gar2 [Neosartorya fischeri NRRL 181] gb|EAW25486.1| ribosomal biogenesis protein Gar2 [Neosartorya fischeri NRRL 181] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159292 SustainPine v3.0 222
• AutoFact: ATPase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C2J2_9EUKA 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Vacuolar ATP synthase catalytic subunit A 1.467e-08
Internal
sp_v3.0_unigene159563 SustainPine v3.0 417
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.06e-11
Internal
sp_v3.0_unigene159733 SustainPine v3.0 394
• AutoFact: 40S ribosomal protein S24 n=5 Tax=Physcomitrella patens subsp. patens RepID=A9U2W2_PHYPA 1.0e-37
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Putative Complete
sp_v3.0_unigene159734 SustainPine v3.0 309
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.542e-13
Internal
sp_v3.0_unigene159773 SustainPine v3.0 423
• AutoFact: GK15001 gene product from transcript GK15001-RA 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 1.351e-07
Internal
sp_v3.0_unigene159832 SustainPine v3.0 485
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.359e-16
Internal
sp_v3.0_unigene160013 SustainPine v3.0 390
• AutoFact: NAD-dependent epimerase/dehydratase family protein-like protein n=6 Tax=core eudicotyledons RepID=Q2XPW6_SOLTU 9.00054e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GDP-mannose-3',5'-epimerase 3.392e-09
N-terminus
sp_v3.0_unigene160139 SustainPine v3.0 459
• AutoFact: Probable RPL25-ribosomal protein L23a.e n=2 Tax=Ustilaginaceae RepID=E6ZVX9_9BASI 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.412e-10
Complete
sp_v3.0_unigene160328 SustainPine v3.0 447
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene160384 SustainPine v3.0 467
• AutoFact: GK15001 gene product from transcript GK15001-RA 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.52e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain