Sustainpine_db
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Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19016 SustainPine v3.0 515
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene19339 SustainPine v3.0 1904
AutoFact: protein serine/arginine-rich 22 [Arabidopsis thaliana] ref|NP_001078474.1| protein serine/arginine-rich 22 [Arabidopsis thaliana] emb|CAA19765.1| RSZp22 splicing factor [Arabidopsis thaliana] gb|AAD12769.1| 9G8-like SR protein [Arabidopsis thaliana] emb|C 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Splicing factor, arginine/serine-rich 7 8.677e-15
Complete
sp_v3.0_unigene19393 SustainPine v3.0 1083
AutoFact: aminopeptidase M1 [Arabidopsis thaliana] gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] dbj|BAE99157.1| aminopeptidase like protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative puromycin-sensitive aminopeptidase 4.622e-09
N-terminus
sp_v3.0_unigene19520 SustainPine v3.0 687
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 9.637e-14
C-terminus
sp_v3.0_unigene19623 SustainPine v3.0 483
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 2.982e-12
Internal
sp_v3.0_unigene19857 SustainPine v3.0 298
AutoFact: PRP38_assoc multi-domain protein 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transformer-2-like protein 8.285e-06
C-terminus
sp_v3.0_unigene20041 SustainPine v3.0 2523
AutoFact: putative RNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20223 SustainPine v3.0 950
AutoFact: arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana] sp|P92964.2|RSP31_ARATH RecName: Full=Arginine/serine-rich-splicing factor RSP31 gb|AAL27502.1|AF439831_1 AT3g61860/F21F14_30 [Arabidopsis thaliana] gb|AAM78075.1| AT3g61860/F21F14_30 [Arab 0.0
FL-Next: sp=Arginine/serine-rich-splicing factor RSP31; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Arginine/serine-rich splicing factor RSP41 2.678e-16
Complete
sp_v3.0_unigene20226 SustainPine v3.0 408
AutoFact: Arginine/serine-rich splicing factor RSP41, putative [Solanum demissum] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Arginine/serine-rich splicing factor RSP41 1.565e-16
N-terminus
sp_v3.0_unigene20387 SustainPine v3.0 739
AutoFact: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa Japonica Group] gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa Japonica Group] gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japoni 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleolar phosphoprotein, putative 1.017e-08
C-terminus
sp_v3.0_unigene20420 SustainPine v3.0 1935
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_001031566.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAK32943.1|AF367357_1 AT4g00830/A_TM018A10_14 [Arabidopsis thaliana] gb|AAM47474.1| AT4g00830/A_TM018A10 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Nucleolar phosphoprotein, putative 6.638e-13
Complete
sp_v3.0_unigene20426 SustainPine v3.0 1322
AutoFact: Arginine/serine-rich-splicing factor, putative n=1 Tax=Ricinus communis RepID=B9SXC4_RICCO 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transformer-SR ribonucleoprotein 2.884e-12
Complete
sp_v3.0_unigene20553 SustainPine v3.0 436
AutoFact: FAP multi-domain protein 1.0e-15
Sma3: Glycine-rich protein 7.373e-14
coding
sp_v3.0_unigene20579 SustainPine v3.0 640
AutoFact: Unassigned protein 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene20682 SustainPine v3.0 3225
AutoFact: zinc finger CCCH domain-containing protein 18 [Arabidopsis thaliana] sp|Q9SJ41.1|C3H18_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 18; Short=AtC3H18 gb|AAD29054.1| hypothetical protein [Arabidopsis thaliana] gb|AEC05899.1| zinc finger C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene20742 SustainPine v3.0 1198
AutoFact: splicing factor [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene20748 SustainPine v3.0 1045
AutoFact: stachyose synthase [Stachys affinis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Stachyose synthase 1.687e-24
Putative N-terminus
sp_v3.0_unigene20781 SustainPine v3.0 905
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AED92689.1| RNA recognition motif-containing 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear acid binding protein, putative 9.266e-23
Putative N-terminus
sp_v3.0_unigene20788 SustainPine v3.0 1506
AutoFact: RNA-binding protein [Medicago truncatula] 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20862 SustainPine v3.0 636
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.683e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain