Sustainpine_db
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Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10883 SustainPine v3.0 3392
• AutoFact: putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gb|AAL90901.1| AT5g20250/F5O24_140 [Arabidopsis thaliana] gb|AAN18198.1| At5g20250/F5O24_140 [Arabidopsis thaliana] dbj|BAE99252.1| seed imbitition protein-like [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Seed imbibition protein 7.083e-15
Complete
sp_v3.0_unigene10952 SustainPine v3.0 1677
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.853e-11
Complete
sp_v3.0_unigene10955 SustainPine v3.0 1793
• AutoFact: RNA binding motif protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ9_CUCME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene11089 SustainPine v3.0 1727
• AutoFact: ABCG subfamily transporter n=2 Tax=Solanum tuberosum RepID=F5C1T7_SOLTU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Putative Complete
sp_v3.0_unigene11093 SustainPine v3.0 1333
• AutoFact: Arginine/serine-rich splicing factor, putative n=1 Tax=Ricinus communis RepID=B9SAR0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Arginine/serine-rich splicing factor, putative 1.249e-13
Complete
sp_v3.0_unigene11253 SustainPine v3.0 1315
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11287 SustainPine v3.0 2505
• AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: U2 snRNP auxiliary factor large subunit B 1.495e-15
Complete
sp_v3.0_unigene11460 SustainPine v3.0 2440
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S1L7_PHYPA 2.0e-12
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase 1.439e-08
C-terminus
sp_v3.0_unigene11500 SustainPine v3.0 2848
• AutoFact: [J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene11501 SustainPine v3.0 1656
• AutoFact: Os05g0427300 protein n=2 Tax=Oryza sativa RepID=Q0DI02_ORYSJ 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11524 SustainPine v3.0 1254
• AutoFact: transformer-SR ribonucleoprotein [Nicotiana tabacum] 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative transformer-SR ribonucleoprotein 2.884e-12
Complete
sp_v3.0_unigene11597 SustainPine v3.0 1888
• AutoFact: pollen-specific kinase partner protein [Solanum lycopersicum] 0.0
• FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rop guanine nucleotide exchange factor, putative 9.139e-23
Putative C-terminus
sp_v3.0_unigene11686 SustainPine v3.0 603
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAD31072.1|AC007357_21 Contains similarity to gb|Y12424 SGRP-1 protein frm Solanum commersonii and contains a PF|00076 RNA rocognition motif [Arabidopsis thaliana] gb|AAL32605.1| Unknown p 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene11718 SustainPine v3.0 2086
• AutoFact: Drf_FH1 multi-domain protein 2.0e-17
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene11776 SustainPine v3.0 1868
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana] dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AEC10093.1| RNA recognition motif-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11807 SustainPine v3.0 1077
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11860 SustainPine v3.0 1196
• AutoFact: putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein At3g13224 3.622e-08
Putative N-terminus
sp_v3.0_unigene11897 SustainPine v3.0 2638
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11908 SustainPine v3.0 2236
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3Y1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ribonucleoprotein 2.323e-11
Complete
sp_v3.0_unigene11964 SustainPine v3.0 2091
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: eIF3b 1.165e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain