Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10022 SustainPine v3.0 2336
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Suppressor of K+ transport growth defect-like protein 3.584e-07
Complete
sp_v3.0_unigene10078 SustainPine v3.0 1016
AutoFact: Coatomer subunit beta, putative n=1 Tax=Ricinus communis RepID=B9RNM4_RICCO 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.39e-12
N-terminus
sp_v3.0_unigene11009 SustainPine v3.0 1642
AutoFact: Auxin influx carrier protein n=1 Tax=Zinnia violacea RepID=C0SU69_ZINEL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin influx carrier component 2.607e-29
C-terminus
sp_v3.0_unigene11241 SustainPine v3.0 1238
AutoFact: Putative Not1 N-terminal protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Not1 N-terminal domain, CCR4-Not complex component family protein, expressed 2.258e-09
N-terminus
sp_v3.0_unigene11966 SustainPine v3.0 746
AutoFact: DNA repair protein RAD50, putative n=1 Tax=Ricinus communis RepID=B9S9Y8_RICCO 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rad50 DNA repair/recombination protein 9.67e-09
N-terminus
sp_v3.0_unigene13080 SustainPine v3.0 967
AutoFact: AP-2 complex subunit sigma [Arabidopsis thaliana] ref|XP_002894072.1| hypothetical protein ARALYDRAFT_891585 [Arabidopsis lyrata subsp. lyrata] sp|Q84WL9.1|AP2S_ARATH RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adapter-related protein complex 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13435 SustainPine v3.0 818
AutoFact: syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] dbj|BAB11546.1| unnamed protein product [Arabidopsis thaliana] gb|AED90890.1| syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene13645 SustainPine v3.0 1197
AutoFact: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SNS7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene13858 SustainPine v3.0 5064
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Katanin p60 ATPase-containing subunit, putative 3.36e-07
Complete
sp_v3.0_unigene14166 SustainPine v3.0 1295
AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S1S1_RICCO 0.0
FL-Next: sp=AP-4 complex subunit epsilon; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene14213 SustainPine v3.0 920
AutoFact: syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] dbj|BAB11546.1| unnamed protein product [Arabidopsis thaliana] gb|AED90890.1| syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene14761 SustainPine v3.0 685
AutoFact: syntaxin homolog A_IG002P16.16 - Arabidopsis thaliana gb|AAB61065.1| contains similarity to syntaxin [Arabidopsis thaliana] 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Qa-SNARE, SYP4/Tlg2p/Syntaxin 16-type 6.985e-09
N-terminus
sp_v3.0_unigene15767 SustainPine v3.0 1450
AutoFact: [U] COG5143 Synaptobrevin/VAMP-like protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle-associated membrane protein, putative 2.959e-15
Complete
sp_v3.0_unigene16487 SustainPine v3.0 1685
AutoFact: R-SNARE, VAMP72-family n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TFG8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16902 SustainPine v3.0 2400
AutoFact: ADP-ribosylation factor [Medicago sativa] emb|CAI29265.1| ADP-ribosylation factor 1 [Medicago truncatula] 0.0
FL-Next: sp=ADP-ribosylation factor 2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: ADP-ribosylation factor 3.566e-24
Complete
sp_v3.0_unigene17031 SustainPine v3.0 1595
AutoFact: vesicle-associated membrane protein 722 [Arabidopsis thaliana] sp|P47192.2|VA722_ARATH RecName: Full=Vesicle-associated membrane protein 722; Short=AtVAMP722; AltName: Full=Synaptobrevin-related protein 1 gb|AAL31896.1|AF419564_1 At2g33120/F25I18.14 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17231 SustainPine v3.0 1014
AutoFact: ADP-ribosylation factor [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 1.027e-26
Putative Complete
sp_v3.0_unigene17292 SustainPine v3.0 1093
AutoFact: Nonclathrin coat protein zeta2-COP n=1 Tax=Solanum lycopersicum RepID=Q9MAZ6_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17345 SustainPine v3.0 1351
AutoFact: prenylated Rab receptor 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Prenylated Rab receptor 2 8.933e-11
Complete
sp_v3.0_unigene17449 SustainPine v3.0 1449
AutoFact: Got1/Sft2-like vescicle transport-like protein [Arabidopsis thaliana] ref|NP_195763.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] ref|NP_001190200.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] emb|CAB62447.1| pu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain