Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene69775 SustainPine v3.0 199
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 3.0e-26
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
Internal
sp_v3.0_unigene69864 SustainPine v3.0 343
AutoFact: Rab-like rab-type small G protein n=1 Tax=Thalassiosira pseudonana RepID=B8BY70_THAPS 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab6/RabH-family small GTPase 3.124e-11
Putative N-terminus
sp_v3.0_unigene70896 SustainPine v3.0 389
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 2.0e-06
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.773e-09
C-terminus
sp_v3.0_unigene70995 SustainPine v3.0 302
AutoFact: auxin influx protein [Populus tomentosa] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin influx carrier component 1.611e-29
Internal
sp_v3.0_unigene72281 SustainPine v3.0 241
AutoFact: AP-4 complex subunit sigma n=7 Tax=rosids RepID=AP4S_ARATH 2.0e-07
FL-Next: sp=AP-4 complex subunit sigma; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene72581 SustainPine v3.0 237
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 1.0e-29
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.31e-13
Putative C-terminus
sp_v3.0_unigene73000 SustainPine v3.0 172
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 4.0e-17
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 5.105e-13
Putative C-terminus
sp_v3.0_unigene73649 SustainPine v3.0 304
AutoFact: AP3-complex subunit beta-A n=3 Tax=Arabidopsis RepID=AP3BA_ARATH 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73757 SustainPine v3.0 461
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
N-terminus
sp_v3.0_unigene74116 SustainPine v3.0 206
AutoFact: vacuolar sorting ATPase Vps4 [Aspergillus fumigatus Af293] gb|EAL92645.1| vacuolar sorting ATPase Vps4, putative [Aspergillus fumigatus Af293] gb|EDP52808.1| vacuolar sorting ATPase Vps4, putative [Aspergillus fumigatus A1163] 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74362 SustainPine v3.0 250
AutoFact: Vacuolar sorting protein 4b, putative (EC:3.6.4.3) 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Suppressor of K+ transport growth defect-like protein 1.197e-08
Internal
sp_v3.0_unigene74570 SustainPine v3.0 368
AutoFact: Vesicle-fusing ATPase n=2 Tax=Arabidopsis RepID=NSF_ARATH 2.0e-10
FL-Next: sp=Vesicle-fusing ATPase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene75025 SustainPine v3.0 408
AutoFact: Clathrin assembly protein AP47 n=3 Tax=Agaricales RepID=D6RN48_COPC7 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap-1, putative 4.891e-09
C-terminus
sp_v3.0_unigene75171 SustainPine v3.0 307
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
Internal
sp_v3.0_unigene75177 SustainPine v3.0 241
AutoFact: putative coatmer beta subunit [Fragaria x ananassa] 2.0e-16
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 6.195e-09
Internal
sp_v3.0_unigene75559 SustainPine v3.0 170
AutoFact: beta-adaptin-like protein B [Arabidopsis thaliana] sp|Q9SUS3.1|APBLB_ARATH RecName: Full=Beta-adaptin-like protein B; Short=At-bB-Ad; Short=At-betaB-Ad; AltName: Full=AP complex subunit beta-B; AltName: Full=Adaptor protein complex AP subunit beta-B; AltN 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75746 SustainPine v3.0 343
AutoFact: clathrin heavy chain, putative [Arabidopsis thaliana] 2.0e-36
FL-Next: sp=Clathrin heavy chain 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Clathrin heavy chain 1.592e-16
Internal
sp_v3.0_unigene75885 SustainPine v3.0 230
AutoFact: AP-2 complex subunit alpha, putative; K11824 AP-2 complex subunit alpha 8.0e-24
FL-Next: sp=AP-2 complex subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene77433 SustainPine v3.0 431
AutoFact: ADP-ribosylation factor (Fragment) n=1 Tax=Gossypium barbadense RepID=Q6XD33_GOSBA 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor, arf, putative 1.792e-14
Putative N-terminus
sp_v3.0_unigene77487 SustainPine v3.0 378
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA5_POPTR 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.832e-26
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain