Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein transport

Term: GO:0015031  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene65361 SustainPine v3.0 200
AutoFact: SecY protein transport family protein [Arabidopsis thaliana] gb|AAM13046.1| putative protein transport protein SEC61 alpha subunit [Arabidopsis thaliana] gb|AEE31071.1| SecY protein transport family protein [Arabidopsis thaliana] 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene65459 SustainPine v3.0 216
AutoFact: Rab5/RabF-family small GTPase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9STK1_PHYPA 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein RHN1 7.655e-14
Internal
sp_v3.0_unigene65492 SustainPine v3.0 264
AutoFact: transitional endoplasmic reticulum ATPase - Arabidopsis thaliana emb|CAB83290.1| transitional endoplasmic reticulum ATPase [Arabidopsis thaliana] 6.0e-18
FL-Next: sp=Cell division control protein 48 homolog D; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cell division cycle protein 48 homolog 5.252e-08
C-terminus
sp_v3.0_unigene65608 SustainPine v3.0 172
AutoFact: RecName: Full=Cell division cycle protein 48 homolog; AltName: Full=Valosin-containing protein homolog; Short=VCP gb|AAA80587.1| valosin-containing protein [Glycine max] gb|ABC87759.1| plamsma membrane-associated AAA-ATPase [Glycine max] 1.0e-10
FL-Next: sp=Cell division cycle protein 48 homolog; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Cell division cycle protein 48 homolog 6.813e-12
Internal
sp_v3.0_unigene65660 SustainPine v3.0 261
AutoFact: vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] ref|NP_974513.1| vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] sp|Q9S9T7.2|VP282_ARATH RecName: Full=Vacuolar protein sorting-associated protein 28 homolog 2 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65669 SustainPine v3.0 210
AutoFact: Ras-related protein RABA4a n=2 Tax=Arabidopsis RepID=RAA4A_ARATH 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65670 SustainPine v3.0 172
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 5.445e-06
Putative C-terminus
sp_v3.0_unigene65682 SustainPine v3.0 300
AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 6.666e-13
Internal
sp_v3.0_unigene65872 SustainPine v3.0 173
AutoFact: ras-related GTP binding protein possessing GTPase activity [Oryza sativa] 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 2.121e-08
Internal
sp_v3.0_unigene65883 SustainPine v3.0 139
AutoFact: Unassigned protein
FL-Next: sp=Cell division control protein 48 homolog A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cell division cycle protein 48 homolog 5.889e-08
Internal
sp_v3.0_unigene65927 SustainPine v3.0 197
AutoFact: [U] COG0201 Preprotein translocase subunit SecY 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Sec61 transport protein 1.592e-08
C-terminus
sp_v3.0_unigene66268 SustainPine v3.0 268
AutoFact: SecY protein n=1 Tax=Populus trichocarpa RepID=B9P8G6_POPTR 1.0e-13
FL-Next: sp=Preprotein translocase subunit SCY1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Preprotein translocase subunit secY, chloroplastic 9.079e-22
C-terminus
sp_v3.0_unigene66327 SustainPine v3.0 286
AutoFact: Oligopeptide transporter OPT family n=1 Tax=Populus trichocarpa RepID=B9GXV8_POPTR 2.0e-14
FL-Next: sp=Oligopeptide transporter 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene66466 SustainPine v3.0 347
AutoFact: Protein translocase, putative n=1 Tax=Ricinus communis RepID=B9T270_RICCO 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene67087 SustainPine v3.0 288
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein ARA-4 3.309e-08
Putative C-terminus
sp_v3.0_unigene67168 SustainPine v3.0 341
AutoFact: putative nitrate transporter [Oryza sativa Japonica Group] gb|EAZ05635.1| hypothetical protein OsI_27853 [Oryza sativa Indica Group] 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptide transporter 1 2.375e-14
Internal
sp_v3.0_unigene67395 SustainPine v3.0 217
AutoFact: oligopeptide transporter 5 [Arabidopsis thaliana] sp|Q9SUA4.1|OPT5_ARATH RecName: Full=Oligopeptide transporter 5; Short=AtOPT5 gb|AAK26002.1|AF360292_1 putative isp4 protein [Arabidopsis thaliana] emb|CAB43855.1| isp4 like protein [Arabidopsis thaliana] 2.0e-19
FL-Next: sp=Oligopeptide transporter 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Oligopeptide transporter OPT family 3.166e-25
Internal
sp_v3.0_unigene67514 SustainPine v3.0 281
AutoFact: vacuolar protein sorting 55 containing protein [Oryza sativa Indica Group] 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene67554 SustainPine v3.0 190
AutoFact: pfam03169, OPT, OPT oligopeptide transporter protein 2.0e-05
FL-Next: sp=Oligopeptide transporter 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene67665 SustainPine v3.0 383
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SY65_PHYPA 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein translocase, putative 2.887e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain