Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent helicase activity

Term: GO:0008026  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene34217 SustainPine v3.0 821
• AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L3A6_ARALL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.398e-10
Putative Complete
sp_v3.0_unigene34219 SustainPine v3.0 2006
• AutoFact: putative F-box and leucine-rich repeat protein [Jatropha curcas] 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene34227 SustainPine v3.0 836
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 45 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.13e-08
Internal
sp_v3.0_unigene34932 SustainPine v3.0 1964
• AutoFact: RNA helicase [Arabidopsis thaliana] 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 31 1.003e-08
N-terminus
sp_v3.0_unigene34959 SustainPine v3.0 990
• AutoFact: putative transcription initiation factor IIF beta subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor IIF subunit beta, putative 4.296e-09
N-terminus
sp_v3.0_unigene35249 SustainPine v3.0 515
• AutoFact: DEAD box protein P68 [Pisum sativum] 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene35667 SustainPine v3.0 1033
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.076e-30
Internal
sp_v3.0_unigene35839 SustainPine v3.0 620
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 9.99967e-42
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene36840 SustainPine v3.0 2677
• AutoFact: DEAD-box ATP-dependent RNA helicase 39 n=3 Tax=Oryza sativa RepID=RH39_ORYSJ 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 39; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 39 5.097e-09
Complete
sp_v3.0_unigene37096 SustainPine v3.0 362
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 24 3.506e-09
Putative N-terminus
sp_v3.0_unigene37536 SustainPine v3.0 1605
• AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent DNA helicase, RecQ family protein, expressed 1.765e-11
C-terminus
sp_v3.0_unigene37623 SustainPine v3.0 1441
• AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative RNA helicase 2.626e-14
Complete
sp_v3.0_unigene37846 SustainPine v3.0 690
• AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.985e-09
Internal
sp_v3.0_unigene37860 SustainPine v3.0 809
• AutoFact: Chalcone synthase (Fragment) n=4 Tax=Pseudotsuga RepID=C6F7B7_PSEMZ 2.0e-18
• FL-Next: tr=Pinocembrin chalcone synthase; Pinus densiflora (Japanese red pine). 0.0
• Sma3: Glycine-rich RNA-binding protein 4.62428e-44
C-terminus
sp_v3.0_unigene39153 SustainPine v3.0 166
• AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 1 6.773e-09
N-terminus
sp_v3.0_unigene39643 SustainPine v3.0 678
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 7.087e-14
Putative N-terminus
sp_v3.0_unigene39814 SustainPine v3.0 355
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene40115 SustainPine v3.0 150
• AutoFact: FAP multi-domain protein 1.0e-16
• Sma3: Glycine-rich protein 3.191e-13
unknown
sp_v3.0_unigene40706 SustainPine v3.0 979
• AutoFact: PREDICTED: similar to Os07g0681600 n=1 Tax=Vitis vinifera RepID=UPI00019834DE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA Helicase 5.744e-14
Internal
sp_v3.0_unigene41078 SustainPine v3.0 181
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 5.0e-19
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 7.871e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain