Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent helicase activity

Term: GO:0008026  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene15571 SustainPine v3.0 266
AutoFact: RecName: Full=Endoribonuclease Dicer homolog 4; AltName: Full=Dicer-like protein 4; Short=OsDCL4; AltName: Full=Protein SHOOT ORGANIZATION 1 gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group] 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dicer-like protein 2.517e-07
N-terminus
sp_v3.0_unigene15839 SustainPine v3.0 1160
AutoFact: putative DEAD/DEAH box helicase [Arabidopsis thaliana] gb|AAF14851.1|AC011664_33 putative helicase [Arabidopsis thaliana] gb|AEE73755.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 4.755e-09
Putative N-terminus
sp_v3.0_unigene15851 SustainPine v3.0 631
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.085e-09
Internal
sp_v3.0_unigene15866 SustainPine v3.0 683
AutoFact: ATP-dependent RNA helicase, putative 4.0e-29
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.366e-13
Putative N-terminus
sp_v3.0_unigene16343 SustainPine v3.0 889
AutoFact: Putative DEAD-box protein abstrakt n=1 Tax=Trifolium pratense RepID=Q2PEY4_TRIPR 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene16754 SustainPine v3.0 648
AutoFact: ATP-dependent RNA helicase A-like protein n=2 Tax=Arabidopsis RepID=Q9FF84_ARATH 4.0e-24
FL-Next: tr=ATP-dependent RNA helicase A-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
N-terminus
sp_v3.0_unigene16783 SustainPine v3.0 1014
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene18481 SustainPine v3.0 1179
AutoFact: Proteasome subunit alpha type n=3 Tax=Picea sitchensis RepID=A9NK08_PICSI 0.0
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 2.449e-24
C-terminus
sp_v3.0_unigene18606 SustainPine v3.0 843
AutoFact: DEAD-box ATP-dependent RNA helicase 46 n=2 Tax=Arabidopsis RepID=F4K6V1_ARATH 6.0e-16
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 46; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene18638 SustainPine v3.0 866
AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative ATP-dependent RNA helicase 6.299e-07
C-terminus
sp_v3.0_unigene18995 SustainPine v3.0 1342
AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 31 3.439e-08
C-terminus
sp_v3.0_unigene19219 SustainPine v3.0 409
AutoFact: ATP-dependent DNA helicase [Lyngbya sp. PCC 8106] gb|EAW34238.1| ATP-dependent DNA helicase [Lyngbya sp. PCC 8106] 1.0e-13
FL-Next: sp=ATP-dependent DNA helicase Q-like 4B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene20056 SustainPine v3.0 2753
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene20538 SustainPine v3.0 633
AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 3.261e-09
Putative N-terminus
sp_v3.0_unigene20553 SustainPine v3.0 436
AutoFact: FAP multi-domain protein 1.0e-15
Sma3: Glycine-rich protein 7.373e-14
coding
sp_v3.0_unigene20701 SustainPine v3.0 1632
AutoFact: DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana] sp|Q84W89.2|RH37_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 37 gb|AAD23001.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana] gb|AEC10133.1| DEAD-box ATP-dependent RNA h 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.676e-24
C-terminus
sp_v3.0_unigene21071 SustainPine v3.0 1476
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 small nuclear ribonucleoprotein 6.725e-12
Putative Complete
sp_v3.0_unigene21189 SustainPine v3.0 970
AutoFact: [L] COG4581 Superfamily II RNA helicase 4.0e-12
FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative helicase 1.251e-06
C-terminus
sp_v3.0_unigene21763 SustainPine v3.0 1942
AutoFact: ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 13 1.767e-08
Complete
sp_v3.0_unigene21935 SustainPine v3.0 788
AutoFact: leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily protein [Arabidopsis thaliana] dbj|BAB11189.1| unnamed protein product [Arabidopsis thaliana] gb|AAL06927.1| AT5g23340/MKD15_20 [Arabidopsis thaliana] gb|AAM91352.1| At5g23340/MKD15_2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain