Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent helicase activity

Term: GO:0008026  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene142848 SustainPine v3.0 310
• AutoFact: Helicase, C-terminal; Zinc finger, CCHC-type; GUCT [Medicago truncatula] 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 7 6.243e-11
Internal
sp_v3.0_unigene143072 SustainPine v3.0 201
• AutoFact: Eukaryotic initiation factor 4A-3 n=2 Tax=Arabidopsis RepID=IF4A3_ARATH 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.817e-09
Internal
sp_v3.0_unigene143430 SustainPine v3.0 759
• AutoFact: 26S proteasome regulatory subunit N8 [Arabidopsis thaliana] sp|O24412.1|PSD7_ARATH RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit 7; AltName: Full=26S proteasome regulatory subunit rpn8; AltName: Full=Protein MOV34 gb|AAK55681.1|AF378 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene148088 SustainPine v3.0 499
• AutoFact: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=2 Tax=Arabidopsis thaliana RepID=DHX8_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 4.396e-10
Internal
sp_v3.0_unigene148679 SustainPine v3.0 209
• AutoFact: putative helicase [Oryza sativa Japonica Group] 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: ATP-dependent RNA helicase, putative 3.916e-06
Internal
sp_v3.0_unigene148818 SustainPine v3.0 174
• AutoFact: mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL52650.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149055 SustainPine v3.0 289
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene149220 SustainPine v3.0 292
• AutoFact: DEAD-box ATP-dependent RNA helicase 52 [Arabidopsis thaliana] sp|Q9M2F9.1|RH52_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 52 emb|CAB68195.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAK83627.1| AT3g58570/F14P22_160 [A 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 37 4.546e-08
Internal
sp_v3.0_unigene149236 SustainPine v3.0 299
• AutoFact: Polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3X6_SOLDE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149497 SustainPine v3.0 126
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 3.0e-17
• FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene149558 SustainPine v3.0 192
• AutoFact: DEAD-box ATP-dependent RNA helicase 39 n=3 Tax=Oryza sativa RepID=RH39_ORYSJ 5.0e-13
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 39; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 39 2.399e-09
Internal
sp_v3.0_unigene149755 SustainPine v3.0 174
• AutoFact: ATP-dependent RNA helicase eIF4A n=2 Tax=Ustilaginaceae RepID=IF4A_USTMA 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 2 2.486e-08
Internal
sp_v3.0_unigene149800 SustainPine v3.0 362
• AutoFact: RNA helicase, DRH1 [Arabidopsis thaliana] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 14 4.022e-08
Putative C-terminus
sp_v3.0_unigene150391 SustainPine v3.0 357
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.384e-09
C-terminus
sp_v3.0_unigene150397 SustainPine v3.0 198
• AutoFact: ATP-dependent RNA helicase DBP3 n=1 Tax=Phaeosphaeria nodorum SN15 RepID=DBP3_PHANO 3.0e-05
• FL-Next: tr=DEAD-domain-containing protein; Coccomyxa subellipsoidea C-169. 0.0
Internal
sp_v3.0_unigene150725 SustainPine v3.0 263
• AutoFact: Adenylate kinase 2 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U5L3_9EUKA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene150908 SustainPine v3.0 213
• AutoFact: ATP-dependent RNA helicase SUB2 n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=SUB2_CRYNB 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene150944 SustainPine v3.0 438
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.553e-14
C-terminus
sp_v3.0_unigene151114 SustainPine v3.0 384
• AutoFact: GI13953 n=1 Tax=Drosophila mojavensis RepID=B4KKI2_DROMO 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151275 SustainPine v3.0 412
• AutoFact: PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 n=1 Tax=Ciona intestinalis RepID=UPI000180D1DC 8.0e-30
• FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain