Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent helicase activity

Term: GO:0008026  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene130632 SustainPine v3.0 333
• AutoFact: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AED97425.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] 4.99983e-42
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene131190 SustainPine v3.0 602
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene131219 SustainPine v3.0 322
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 n=3 Tax=Arabidopsis RepID=RH42_ARATH 3.0e-28
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 9.358e-09
Internal
sp_v3.0_unigene131364 SustainPine v3.0 362
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 1.00053e-42
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene131645 SustainPine v3.0 221
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Streptomyces cyclase/dehydrase family protein 8.439e-09
Internal
sp_v3.0_unigene131931 SustainPine v3.0 449
• AutoFact: ethylene-responsive RNA helicase [Solanum lycopersicum] 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 20 4.622e-09
Internal
sp_v3.0_unigene131946 SustainPine v3.0 380
• AutoFact: Adenylate kinase 1, putative n=1 Tax=Ricinus communis RepID=B9RMJ0_RICCO 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 1, putative 1.563e-08
Putative N-terminus
sp_v3.0_unigene132331 SustainPine v3.0 323
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 6.0e-39
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 8.289e-07
Internal
sp_v3.0_unigene132749 SustainPine v3.0 325
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 1.96182e-44
• FL-Next: tr=U5 small nuclear ribonucleoprotein 200 kDa helicase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene132877 SustainPine v3.0 451
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 14 dbj|BAD68264.1| putative p68 RNA helicase [Oryza sativa Japonica Group] gb|EEE53957.1| hypothetical protein OsJ_00557 [Oryza sativa Japonica Group] gb|ACS44654.1| ATP-dependent RNA helicase DB10 [Oryza 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.057e-10
Internal
sp_v3.0_unigene134597 SustainPine v3.0 241
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 6.0e-15
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene135681 SustainPine v3.0 433
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAJ6_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.633e-09
Putative C-terminus
sp_v3.0_unigene137378 SustainPine v3.0 262
• AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 5.0e-33
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 6.474e-14
Internal
sp_v3.0_unigene138934 SustainPine v3.0 403
• AutoFact: Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=2 Tax=Arabidopsis thaliana RepID=Q8VY00_ARATH 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pre-mRNA splicing factor RNA helicase 7.997e-09
Internal
sp_v3.0_unigene140586 SustainPine v3.0 578
• AutoFact: DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 56 9.077e-09
N-terminus
sp_v3.0_unigene140613 SustainPine v3.0 428
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 1.00053e-42
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
N-terminus
sp_v3.0_unigene141905 SustainPine v3.0 182
• AutoFact: RNA helicase [Arabidopsis thaliana] 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene142008 SustainPine v3.0 359
• AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fibrillarin, putative 6.336e-08
Putative N-terminus
sp_v3.0_unigene142174 SustainPine v3.0 230
• AutoFact: Eukaryotic initiation factor 4A (ATP-dependent RNA helicase eIF4A) n=1 Tax=Chlorella variabilis RepID=E1ZM95_9CHLO 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic initiation factor 4A-like protein 5.506e-08
Putative N-terminus
sp_v3.0_unigene142323 SustainPine v3.0 551
• AutoFact: DEAD box RNA helicase [Pisum sativum] gb|AAR97917.1| DEAD box RNA helicase [Pisum sativum] 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.27e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain