Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent helicase activity

Term: GO:0008026  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene102649 SustainPine v3.0 555
• AutoFact: transcription initiation factor TFIIF beta subunit [Arabidopsis thaliana] gb|AAF87120.1|AC006434_16 F10A5.27 [Arabidopsis thaliana] gb|AAG40024.1|AF324673_1 At1g75700 [Arabidopsis thaliana] gb|AAG42013.1|AF327423_1 putative transcription initiation factor 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor IIF subunit beta, putative 5.167e-09
C-terminus
sp_v3.0_unigene102741 SustainPine v3.0 566
• AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene102929 SustainPine v3.0 700
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene103028 SustainPine v3.0 433
• AutoFact: RVT_2 domain containing protein 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene103356 SustainPine v3.0 430
• AutoFact: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=2 Tax=Arabidopsis thaliana RepID=DHX8_ARATH 4.99983e-42
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative RNA helicase 4.763e-07
Internal
sp_v3.0_unigene103424 SustainPine v3.0 304
• AutoFact: Isoform 2 of Endoribonuclease Dicer homolog 4 n=1 Tax=Oryza sativa Japonica Group RepID=A7LFZ6-2 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 1.952e-14
Internal
sp_v3.0_unigene103473 SustainPine v3.0 214
• AutoFact: [L] COG4581 Superfamily II RNA helicase 3.0e-11
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene103504 SustainPine v3.0 211
• AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 1.0e-11
• FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene103683 SustainPine v3.0 335
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 8.00001e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 37 3.659e-08
Internal
sp_v3.0_unigene104254 SustainPine v3.0 954
• AutoFact: putative DNA helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA Helicase 2.996e-17
Putative C-terminus
sp_v3.0_unigene104491 SustainPine v3.0 491
• AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2 family DNA-dependent ATPase 3.928e-26
Internal
sp_v3.0_unigene104728 SustainPine v3.0 441
• AutoFact: protein dicer-like 3 [Arabidopsis thaliana] emb|CAB88120.1| putative protein [Arabidopsis thaliana] gb|ABF19799.1| dicer-like 3 [Arabidopsis thaliana] gb|AEE77842.1| protein dicer-like 3 [Arabidopsis thaliana] 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105016 SustainPine v3.0 507
• AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9SC13_RICCO 6.0e-31
• FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 0.0
• Sma3: Dicer-like 4 1.165e-08
N-terminus
sp_v3.0_unigene105143 SustainPine v3.0 299
• AutoFact: ATP-dependent DNA helicase RecQ, putative [Arabidopsis thaliana] 7.0e-19
• FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105465 SustainPine v3.0 296
• AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9S370_RICCO 9.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105545 SustainPine v3.0 410
• AutoFact: putative Helicase SKI2W [Oryza sativa Japonica Group] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene105801 SustainPine v3.0 411
• AutoFact: [L] COG0514 Superfamily II DNA helicase 4.0e-23
• FL-Next: Isoform 2 of Mediator of RNA polymerase II transcription subunit 34 OS=Arabidopsis thaliana GN=MED34 0.0
Internal
sp_v3.0_unigene106189 SustainPine v3.0 337
• AutoFact: Dicer-like protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IKF4_POPTR 2.0e-17
• FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 3 OS=Arabidopsis thaliana GN=DCL3 0.0
• Sma3: Dicer-like 3 7.997e-09
Internal
sp_v3.0_unigene106507 SustainPine v3.0 372
• AutoFact: DEAD-box ATP-dependent RNA helicase 41 n=4 Tax=Oryza sativa RepID=RH41_ORYSJ 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 41 1.082e-09
Internal
sp_v3.0_unigene106738 SustainPine v3.0 301
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 22 7.0e-31
• FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 22 2.166e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain