Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent helicase activity

Term: GO:0008026  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene79163 SustainPine v3.0 299
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.637e-35
Internal
sp_v3.0_unigene79197 SustainPine v3.0 441
• AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJL1_PHYPA 0.0
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SNF2 family DNA-dependent ATPase 2.652e-06
Internal
sp_v3.0_unigene79376 SustainPine v3.0 156
• AutoFact: ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] gb|EAU80684.1| ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene79539 SustainPine v3.0 251
• AutoFact: Apo-Eif4aiii n=2 Tax=Aureococcus anophagefferens RepID=F0Y6T8_9STRA 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 2 1.869e-08
C-terminus
sp_v3.0_unigene79551 SustainPine v3.0 261
• AutoFact: putative helicase [Oryza sativa Japonica Group] 3.99931e-42
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 1.182e-11
Internal
sp_v3.0_unigene79570 SustainPine v3.0 307
• AutoFact: DEAD-box ATP-dependent RNA helicase 52 n=2 Tax=Arabidopsis RepID=RH52_ARATH 3.0e-07
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 52; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 37 1.855e-08
Internal
sp_v3.0_unigene79696 SustainPine v3.0 227
• AutoFact: DEAD-box ATP-dependent RNA helicase 39 [Arabidopsis thaliana] sp|Q56X76.2|RH39_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 39 gb|AAQ65197.1| At4g09730 [Arabidopsis thaliana] dbj|BAD43110.1| unnamed protein product [Arabidopsis thaliana] dbj|BA 5.0e-18
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 39; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79909 SustainPine v3.0 329
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 35A dbj|BAD38045.1| putative DEAD-box protein abstrakt [Oryza sativa Japonica Group] 1.0e-07
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 35A; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene79936 SustainPine v3.0 241
• AutoFact: similar to ATP-dependent RNA helicase [Arabidopsis thaliana] gb|AAM48010.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 2.0e-14
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 47, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene80010 SustainPine v3.0 198
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Arabidopsis thaliana] gb|AAL67014.1| putative RNA helicase [Arabidopsis thaliana] gb|AAM91806.1| putative RNA helicase [Arabidopsis thaliana] gb|AEE31492.1| pre-mRNA-splicing factor ATP-dependent 5.0e-09
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene80058 SustainPine v3.0 180
• AutoFact: putative helicase [Oryza sativa Japonica Group] 2.0e-24
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative RNA helicase A 3.02e-11
Internal
sp_v3.0_unigene80111 SustainPine v3.0 125
• AutoFact: Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=2 Tax=Agaricales RepID=A8NXX3_COPC7 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80201 SustainPine v3.0 250
• AutoFact: ATP-dependent RNA helicase-like protein n=2 Tax=Oryza sativa RepID=Q69J41_ORYSJ 6.0e-28
• FL-Next: tr=ATP-dependent RNA helicase-like protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene80303 SustainPine v3.0 175
• AutoFact: Endoribonuclease Dicer homolog 2 n=2 Tax=Arabidopsis thaliana RepID=DCL2_ARATH 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 1.464e-13
Internal
sp_v3.0_unigene80456 SustainPine v3.0 216
• AutoFact: Os07g0681600 protein n=3 Tax=Oryza sativa RepID=Q7XHW1_ORYSJ 1.0e-26
• FL-Next: Isoform 2 of ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 0.0
Internal
sp_v3.0_unigene80531 SustainPine v3.0 114
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SE87_RICCO 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80732 SustainPine v3.0 394
• AutoFact: ATP-dependent RNA helicase FAL1 [Coprinopsis cinerea okayama7#130] gb|EAU84657.1| ATP-dependent RNA helicase FAL1 [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 9.996e-12
Internal
sp_v3.0_unigene80773 SustainPine v3.0 129
• AutoFact: Unassigned protein
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 13; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene81131 SustainPine v3.0 181
• AutoFact: RNA helicase [Arabidopsis thaliana] 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.21e-08
Internal
sp_v3.0_unigene81227 SustainPine v3.0 242
• AutoFact: ATP-dependent RNA helicase dhh1 [Coprinopsis cinerea okayama7#130] gb|EAU89171.1| ATP-dependent RNA helicase dhh1 [Coprinopsis cinerea okayama7#130] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 6 9.382e-08
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain