Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone H2A

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene71375 SustainPine v3.0 213
AutoFact: Histone H2A n=1 Tax=Chlorella variabilis RepID=E1Z345_9CHLO 8.0e-08
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 2.71e-06
Internal
sp_v3.0_unigene71612 SustainPine v3.0 170
AutoFact: Histone H2A n=2 Tax=Chlamydomonadales RepID=A8HRZ9_CHLRE 4.0e-15
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Internal
sp_v3.0_unigene72183 SustainPine v3.0 139
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.0e-08
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 9.364e-21
Internal
sp_v3.0_unigene94863 SustainPine v3.0 368
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-16
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene96128 SustainPine v3.0 521
Sma3: Histone H2A 1.224e-08
unknown
sp_v3.0_unigene97825 SustainPine v3.0 464
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 1.0e-33
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene101476 SustainPine v3.0 525
Sma3: Histone H2A 2.422e-29
unknown
sp_v3.0_unigene101905 SustainPine v3.0 466
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene117515 SustainPine v3.0 215
AutoFact: Histone H2A n=2 Tax=Selaginella moellendorffii RepID=D8RG98_SELML 2.0e-22
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative C-terminus
sp_v3.0_unigene127466 SustainPine v3.0 992
AutoFact: NADH-dependent hydroxypyruvate reductase [Pachysandra terminalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative C-terminus
sp_v3.0_unigene127596 SustainPine v3.0 646
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 4.00001e-41
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene127737 SustainPine v3.0 1014
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 3.0e-20
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene127833 SustainPine v3.0 963
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 5.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene128023 SustainPine v3.0 400
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 2.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene128204 SustainPine v3.0 495
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene140368 SustainPine v3.0 1062
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 6.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene142362 SustainPine v3.0 569
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 3.0e-13
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene143382 SustainPine v3.0 262
AutoFact: PREDICTED: similar to H2A histone family, member Z isoform 1 n=1 Tax=Canis lupus familiaris RepID=UPI00005A03C9 1.0e-12
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene143428 SustainPine v3.0 306
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 1.0e-14
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene144492 SustainPine v3.0 892
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain