Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: copper ion binding

Term: GO:0005507  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene145865 SustainPine v3.0 1242
• AutoFact: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=10 Tax=rosids RepID=METE_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cobalamin-independent methionine synthase 8.389e-24
Misassembled
sp_v3.0_unigene145916 SustainPine v3.0 492
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene145988 SustainPine v3.0 1069
• AutoFact: methionine synthase protein [Sorghum bicolor] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cobalamin-independent methionine synthase 8.063e-23
C-terminus
sp_v3.0_unigene146201 SustainPine v3.0 344
• AutoFact: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=10 Tax=rosids RepID=METE_ARATH 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1.595e-22
Internal
sp_v3.0_unigene146422 SustainPine v3.0 554
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 1.0e-35
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene146444 SustainPine v3.0 293
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 4.00001e-41
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene146756 SustainPine v3.0 267
• AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Dendrobium hybrid cultivar RepID=A4GKJ0_9ASPA 1.00053e-42
• FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Methionine S-adenosyl transferase 1.736e-35
Internal
sp_v3.0_unigene146916 SustainPine v3.0 441
• AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Dendrobium hybrid cultivar RepID=A4GKJ0_9ASPA 0.0
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Methionine S-adenosyl transferase 1.285e-35
Internal
sp_v3.0_unigene147656 SustainPine v3.0 999
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 0.0
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147659 SustainPine v3.0 706
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 1.0e-18
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147662 SustainPine v3.0 603
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147663 SustainPine v3.0 507
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 3.00018e-42
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Putative N-terminus
sp_v3.0_unigene147664 SustainPine v3.0 501
• AutoFact: Cytosolic glutamine synthetase (Fragment) n=1 Tax=Daucus carota RepID=O22505_DAUCA 0.0
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147666 SustainPine v3.0 541
• AutoFact: Glutamine synthetase cytosolic isozyme 1 n=35 Tax=Spermatophyta RepID=GLNA1_VITVI 9.94922e-44
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene148514 SustainPine v3.0 232
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_198, whole genome shotgun sequence 5.752e-11
Internal
sp_v3.0_unigene148918 SustainPine v3.0 364
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 6.0e-36
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene149271 SustainPine v3.0 256
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 7.0e-16
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 2.522e-20
Internal
sp_v3.0_unigene149331 SustainPine v3.0 164
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 6.0e-14
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 2.429e-22
Internal
sp_v3.0_unigene149526 SustainPine v3.0 228
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 9.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene149534 SustainPine v3.0 141
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 4.0e-10
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 1.569e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain