Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3471 SustainPine v3.0 1136
• AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7S4_RICCO 5.0e-09
• FL-Next: tr=Nucleic acid binding protein, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Nucleic acid binding protein, putative 4.484e-10
C-terminus
sp_v3.0_unigene3478 SustainPine v3.0 1337
• AutoFact: zinc finger protein 6 [Arabidopsis thaliana] sp|Q39265.1|ZFP6_ARATH RecName: Full=Zinc finger protein 6 gb|AAF98212.1|AC007152_8 zinc finger protein zep6 [Arabidopsis thaliana] gb|AAA87302.1| zinc finger protein [Arabidopsis thaliana] gb|AAK91404.1| At1g6 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene3483 SustainPine v3.0 1023
• AutoFact: Endonuclease n=1 Tax=Cucumis melo subsp. melo RepID=E5GCK8_CUCME 0.0
• FL-Next: sp=Crossover junction endonuclease MUS81; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene3523 SustainPine v3.0 2421
• AutoFact: pre-mRNA-processing factor 39 [Arabidopsis thaliana] gb|AAL07170.1| unknown protein [Arabidopsis thaliana] gb|AAM14126.1| unknown protein [Arabidopsis thaliana] gb|AAM65430.1| unknown [Arabidopsis thaliana] gb|AEE27652.1| pre-mRNA-processing factor 39 [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA-processing protein prp39, putative 2.848e-09
C-terminus
sp_v3.0_unigene3528 SustainPine v3.0 2264
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: IQ calmodulin-binding motif family protein, expressed 3.056e-10
Complete
sp_v3.0_unigene3654 SustainPine v3.0 1693
• AutoFact: GDP-mannose 4,6 dehydratase 1 [Arabidopsis thaliana] sp|Q9SNY3.1|GMD1_ARATH RecName: Full=GDP-mannose 4,6 dehydratase 1; AltName: Full=GDP-D-mannose dehydratase 1; Short=GMD 1 gb|AAF07199.1|AF195140_1 GDP-D-mannose 4,6-dehydratase [Arabidopsis thaliana] d 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3668 SustainPine v3.0 860
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 1.788e-13
Putative C-terminus
sp_v3.0_unigene3679 SustainPine v3.0 4014
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5'->3' exoribonuclease, putative 8.416e-16
Complete
sp_v3.0_unigene3723 SustainPine v3.0 3267
• AutoFact: Cl-channel clc-7 n=2 Tax=Populus trichocarpa RepID=B9N0H5_POPTR 0.0
• FL-Next: sp=Putative chloride channel-like protein CLC-g; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cl-channel clc-7 7.488e-20
Complete
sp_v3.0_unigene3761 SustainPine v3.0 2349
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 0.0
• FL-Next: sp=B3 domain-containing protein Os07g0563300; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene3805 SustainPine v3.0 2394
• AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative DNA helicase RecQsim 7.738e-09
C-terminus
sp_v3.0_unigene3828 SustainPine v3.0 2917
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DsRNA-specific nuclease dicer and related ribonuclease 1.06e-11
Putative Complete
sp_v3.0_unigene3833 SustainPine v3.0 1828
• AutoFact: inositol phosphate kinase [Hordeum vulgare] 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Inositol phosphate kinase 1.568e-22
Complete
sp_v3.0_unigene3838 SustainPine v3.0 1846
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene3964 SustainPine v3.0 2411
• AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protease ftsH homolog 1.848e-13
C-terminus
sp_v3.0_unigene3989 SustainPine v3.0 1333
• AutoFact: 3'-5' exonuclease, putative n=1 Tax=Ricinus communis RepID=B9SDW9_RICCO 0.0
• FL-Next: tr=3'-5' exonuclease, putative; Ricinus communis (Castor bean). 0.0
• Sma3: RRP6-like protein 3 9.747e-06
C-terminus
sp_v3.0_unigene4007 SustainPine v3.0 1829
• AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor 6.0e-16
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA polymerase II ctd phosphatase, putative 2.807e-08
C-terminus
sp_v3.0_unigene4038 SustainPine v3.0 3403
• AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Cell division protein ftsH, putative 1.894e-14
Complete
sp_v3.0_unigene4049 SustainPine v3.0 3369
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.094e-39
Complete
sp_v3.0_unigene4100 SustainPine v3.0 1421
• AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bet v I allergen-like 8.553e-18
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain