Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene9732 SustainPine v3.0 1374
• AutoFact: amino acid carrier, putative [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Amino acid permease 0.0
C-terminus
sp_v3.0_unigene9777 SustainPine v3.0 721
• AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial [Medicago truncatula] 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DsRNA-specific nuclease dicer and related ribonuclease 5.117e-08
Internal
sp_v3.0_unigene9781 SustainPine v3.0 1500
• AutoFact: DNA polymerase III subunit epsilon n=3 Tax=Zea mays RepID=B6TZF8_MAIZE 0.0
• FL-Next: tr=DNA polymerase III subunit epsilon; Zea mays (Maize). 0.0
Complete
sp_v3.0_unigene9792 SustainPine v3.0 2331
• AutoFact: DUF1644 domain containing protein 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9831 SustainPine v3.0 2609
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5'->3' exoribonuclease, putative 2.888e-16
Complete
sp_v3.0_unigene9860 SustainPine v3.0 1583
• AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRE3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein MLO, putative 1.247e-16
C-terminus
sp_v3.0_unigene9888 SustainPine v3.0 1783
• AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
• FL-Next: tr=Rac-like GTP binding protein; Picea mariana (Black spruce) (Abies mariana). 0.0
• Sma3: Rac-like GTP binding protein 0.0
Complete
sp_v3.0_unigene9901 SustainPine v3.0 1503
• AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9955 SustainPine v3.0 1550
• AutoFact: tropine dehydrogenase [Arabidopsis thaliana] dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gb|AAO42448.1| putative short chain alcohol dehydro 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative tropinone reductase 0.0
Complete
sp_v3.0_unigene10015 SustainPine v3.0 1192
• AutoFact: Gly_rich multi-domain protein 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene10055 SustainPine v3.0 1979
• AutoFact: XS domain containing protein 2.0e-12
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Chromosome chr13 scaffold_74, whole genome shotgun sequence 8.749e-07
Putative Complete
sp_v3.0_unigene10082 SustainPine v3.0 1598
• AutoFact: CONSTANS interacting protein 2a n=1 Tax=Solanum lycopersicum RepID=Q2VY18_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10117 SustainPine v3.0 1107
• AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene10136 SustainPine v3.0 1676
• AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ccaat-binding transcription factor, putative 3.722e-26
Complete
sp_v3.0_unigene10173 SustainPine v3.0 256
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 5.0e-38
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 5'->3' exoribonuclease, putative 3.297e-16
Internal
sp_v3.0_unigene10211 SustainPine v3.0 2307
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: C2-H2 zinc finger protein 7.93e-09
Complete
sp_v3.0_unigene10238 SustainPine v3.0 481
• AutoFact: C2H2 type zinc finger transcription factor-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9FH19_ARATH 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene10259 SustainPine v3.0 759
• AutoFact: putative tRNA modification GTPase trmE [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Probable tRNA modification GTPase mnmE; Cyanidium caldarium. Plastid; Chloroplast. 0.0
C-terminus
sp_v3.0_unigene10316 SustainPine v3.0 1740
• AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RabGAP/TBC protein 3.841e-12
Complete
sp_v3.0_unigene10355 SustainPine v3.0 972
• AutoFact: Inositol-tetrakisphosphate 1-kinase 3 n=2 Tax=Andropogoneae RepID=B6TDJ5_MAIZE 9.0e-17
• FL-Next: Isoform 2 of Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidopsis thaliana GN=ITPK2 0.0
• Sma3: Inositol-tetrakisphosphate 1-kinase 3 5.432e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain