Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene202344 SustainPine v3.0 407
AutoFact: Ara-5;GTP-binding protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42089_ARATH 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 2.694e-14
N-terminus
sp_v3.0_unigene202354 SustainPine v3.0 265
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 1.04e-10
Internal
sp_v3.0_unigene202403 SustainPine v3.0 464
AutoFact: Dimer_Tnp_hAT domain containing protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 2.988e-12
Internal
sp_v3.0_unigene202405 SustainPine v3.0 684
AutoFact: DUF659 domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene202464 SustainPine v3.0 837
AutoFact: rve domain containing protein 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.588e-14
Putative N-terminus
sp_v3.0_unigene202478 SustainPine v3.0 599
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.432e-26
Putative C-terminus
sp_v3.0_unigene202508 SustainPine v3.0 596
AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene202606 SustainPine v3.0 399
AutoFact: DUF659 domain containing protein 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene202830 SustainPine v3.0 651
AutoFact: 40S ribosomal protein S9 n=43 Tax=Coelomata RepID=RS9_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S9 1.54143e-44
Complete
sp_v3.0_unigene202831 SustainPine v3.0 384
AutoFact: Unassigned protein
FL-Next: tr=JHL18I08.5 protein; Jatropha curcas. 0.0
Sma3: GTP1/OBG family protein, expressed 6.199e-10
Putative N-terminus
sp_v3.0_unigene202936 SustainPine v3.0 474
AutoFact: Dimer_Tnp_hAT domain containing protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene203206 SustainPine v3.0 592
AutoFact: Nuclear transport factor 2 n=2 Tax=Sclerotiniaceae RepID=A6RRF8_BOTFB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transport factor 2 8.118e-21
Putative Complete
sp_v3.0_unigene203270 SustainPine v3.0 393
AutoFact: DUF659 domain containing protein 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene203308 SustainPine v3.0 282
AutoFact: DUF659 domain containing protein 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene203337 SustainPine v3.0 687
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative retroelement pol polyprotein 8.42e-15
Internal
sp_v3.0_unigene203372 SustainPine v3.0 577
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 1.155e-08
Putative C-terminus
sp_v3.0_unigene203402 SustainPine v3.0 464
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene203439 SustainPine v3.0 334
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 3.957e-12
Internal
sp_v3.0_unigene203448 SustainPine v3.0 480
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.614e-27
Internal
sp_v3.0_unigene203492 SustainPine v3.0 326
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 3.0e-17
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.762e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain