Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7682 SustainPine v3.0 3908
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SF29_RICCO 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7697 SustainPine v3.0 1491
AutoFact: BcpLH protein [Brassica rapa subsp. pekinensis] gb|AAT77418.1| dsRNA-binding protein LH-c [Brassica napus] 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7772 SustainPine v3.0 1453
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.53e-17
C-terminus
sp_v3.0_unigene7777 SustainPine v3.0 1148
AutoFact: Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 n=3 Tax=Populus RepID=B9HUR7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Sulfate transporter 0.0
C-terminus
sp_v3.0_unigene7784 SustainPine v3.0 1703
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 1 protein, putative 5.196e-19
Complete
sp_v3.0_unigene7798 SustainPine v3.0 896
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 9.94922e-44
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene7812 SustainPine v3.0 2015
AutoFact: 8-oxoguanine DNA glycosylase [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 8-oxoguanine DNA glycosylase 3.449e-09
Complete
sp_v3.0_unigene7824 SustainPine v3.0 1561
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene7835 SustainPine v3.0 2319
AutoFact: exonuclease family protein [Arabidopsis thaliana] dbj|BAB11450.1| exonuclease-like protein [Arabidopsis thaliana] gb|AED91196.1| exonuclease family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative exonuclease 2.367e-11
Complete
sp_v3.0_unigene7849 SustainPine v3.0 2132
AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene7855 SustainPine v3.0 1482
AutoFact: inositol phosphate kinase [Hordeum vulgare] 0.0
FL-Next: sp=Inositol-tetrakisphosphate 1-kinase 1; Zea mays (Maize). 0.0
Sma3: Inositol phosphate kinase 1.568e-22
Putative Complete
sp_v3.0_unigene7882 SustainPine v3.0 765
AutoFact: GTP binding protein [Arabidopsis thaliana] gb|AAL32618.1| putative protein [Arabidopsis thaliana] gb|AAO29986.1| putative protein [Arabidopsis thaliana] gb|AEE79624.1| GTP binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene7895 SustainPine v3.0 1964
AutoFact: GTP-binding protein hflx, putative n=1 Tax=Ricinus communis RepID=B9R801_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7934 SustainPine v3.0 1511
AutoFact: Polyketide_cyc2 multi-domain protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 4.599e-16
Complete
sp_v3.0_unigene7950 SustainPine v3.0 1112
AutoFact: ubiquitin conjugating enzyme-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene8000 SustainPine v3.0 740
AutoFact: flowering promoting factor 1 [Arabidopsis thaliana] emb|CAA72717.1| FPF1 protein [Arabidopsis thaliana] gb|ABE02402.1| At5g24860 [Arabidopsis thaliana] gb|AED93370.1| flowering promoting factor 1 [Arabidopsis thaliana] 8.0e-30
FL-Next: sp=Flowering-promoting factor 1; Sinapis alba (White mustard) (Brassica hirta). 0.0
Sma3: FPF1 protein 1.818e-09
Complete
sp_v3.0_unigene8014 SustainPine v3.0 1646
AutoFact: E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] ref|NP_001189915.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] sp|Q8RWB8.1|UPL6_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL6; Short=Ubiquitin-protein ligase 6 gb|AAM13201.1| unkn 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene8020 SustainPine v3.0 1032
AutoFact: GTP-binding protein [Arabidopsis thaliana] gb|AAN12960.1| unknown protein [Arabidopsis thaliana] gb|AEE82230.1| GTP-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene8157 SustainPine v3.0 1225
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor serine-threonine protein kinase, putative 4.835e-15
N-terminus
sp_v3.0_unigene8179 SustainPine v3.0 1771
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAM14872.1| Expressed protein [Arabidopsis thaliana] gb|ABD19677.1| At2g19385 [Arabidopsis thaliana] gb|AEC06875.1| zinc ion binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain