Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene201945 SustainPine v3.0 219
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene202024 SustainPine v3.0 469
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.053e-22
Internal
sp_v3.0_unigene202139 SustainPine v3.0 993
• AutoFact: Os03g0569900 protein (Fragment) n=5 Tax=Oryza sativa RepID=Q0DQQ8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear acid binding protein, putative 1.212e-22
C-terminus
sp_v3.0_unigene202405 SustainPine v3.0 684
• AutoFact: DUF659 domain containing protein 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene202454 SustainPine v3.0 470
• AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.148e-13
Internal
sp_v3.0_unigene202606 SustainPine v3.0 399
• AutoFact: DUF659 domain containing protein 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene202649 SustainPine v3.0 535
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI4_PINTA 5.60519e-45
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 2.8026e-45
C-terminus
sp_v3.0_unigene202699 SustainPine v3.0 462
• AutoFact: HNH endonuclease domain-containing protein (Fragment) n=5 Tax=Pseudotsuga RepID=C6F7K9_PSEMZ 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene202728 SustainPine v3.0 608
• AutoFact: Protein kinase family protein n=1 Tax=Glycine max RepID=C6ZRR0_SOYBN 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 1.208e-07
C-terminus
sp_v3.0_unigene203228 SustainPine v3.0 464
• AutoFact: Ribonuclease H n=1 Tax=Thermaerobacter marianensis DSM 12885 RepID=E6SJJ9_THEM7 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative RNase 8.772e-06
N-terminus
sp_v3.0_unigene203422 SustainPine v3.0 522
• AutoFact: rve domain containing protein 8.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.674e-08
Internal
sp_v3.0_unigene203492 SustainPine v3.0 326
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 3.0e-17
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.762e-09
C-terminus
sp_v3.0_unigene203647 SustainPine v3.0 453
• AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative gag-pol polyprotein 1.584e-10
Internal
sp_v3.0_unigene203677 SustainPine v3.0 447
• AutoFact: GRAM domain containing protein 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 2.585e-36
C-terminus
sp_v3.0_unigene203796 SustainPine v3.0 389
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.317e-15
Internal
sp_v3.0_unigene203817 SustainPine v3.0 438
• AutoFact: exonuclease family protein [Arabidopsis thaliana] ref|NP_851082.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_851083.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_974842.1| exonuclease family protein [Arabidopsis thaliana] dbj| 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
C-terminus
sp_v3.0_unigene204035 SustainPine v3.0 382
• AutoFact: glucosyltransferase [Glycine max] 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Anthocyanidin 5,3-O-glucosyltransferase 2.385e-25
Internal
sp_v3.0_unigene204073 SustainPine v3.0 366
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.991e-13
C-terminus
sp_v3.0_unigene204318 SustainPine v3.0 316
• AutoFact: DUF659 domain containing protein 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene204393 SustainPine v3.0 284
• AutoFact: Unassigned protein 8.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain