Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene195032 SustainPine v3.0 329
• AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Wall-associated kinase, putative 1.613e-15
Internal
sp_v3.0_unigene195101 SustainPine v3.0 156
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 2.0e-08
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene195211 SustainPine v3.0 326
• AutoFact: Unassigned protein 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene195366 SustainPine v3.0 304
• AutoFact: Protein argonaute 7 n=3 Tax=Oryza sativa RepID=AGO7_ORYSJ 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Argonaute protein group 1.402e-36
Internal
sp_v3.0_unigene195445 SustainPine v3.0 210
• AutoFact: Histidine kinase 1 plant, putative n=1 Tax=Ricinus communis RepID=B9SUH7_RICCO 1.0e-21
• FL-Next: sp=Histidine kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Histidine kinase 1 plant, putative 2.205e-11
Internal
sp_v3.0_unigene195563 SustainPine v3.0 471
• AutoFact: Cir, putative n=1 Tax=Ricinus communis RepID=B9S1S8_RICCO 7.0e-24
• FL-Next: sp=Uncharacterized zinc finger CCHC domain-containing protein At4g19190; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene195650 SustainPine v3.0 255
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 2.399e-08
Putative C-terminus
sp_v3.0_unigene195675 SustainPine v3.0 365
• AutoFact: Alba domain containing protein 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene195707 SustainPine v3.0 207
• AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 2.0e-20
• FL-Next: tr=Glutathione S-transferase-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 2.484e-14
Putative C-terminus
sp_v3.0_unigene196306 SustainPine v3.0 490
• AutoFact: Laccase, putative n=1 Tax=Ricinus communis RepID=B9T6M5_RICCO 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 1.82169e-44
C-terminus
sp_v3.0_unigene196315 SustainPine v3.0 200
• AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 5.0e-24
• FL-Next: sp=Phytochrome A-associated F-box protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene196385 SustainPine v3.0 623
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene196448 SustainPine v3.0 410
• AutoFact: DUF1421 multi-domain protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene196691 SustainPine v3.0 419
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 9.004e-08
Internal
sp_v3.0_unigene196777 SustainPine v3.0 298
• AutoFact: Malectin/receptor-like protein kinase [Arabidopsis thaliana] sp|Q9SJT0.1|Y2214_ARATH RecName: Full=Probable receptor-like protein kinase At2g21480; Flags: Precursor gb|AAD23692.1| putative protein kinase [Arabidopsis thaliana] gb|AEC07184.1| Malectin/rece 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pto-like serine/threonine kinase 5.232e-15
Internal
sp_v3.0_unigene196790 SustainPine v3.0 410
• AutoFact: cold inducible histidine kinase 1 [Catharanthus roseus] 4.0e-14
• FL-Next: sp=Histidine kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Histidine kinase osmosensor protein 2.783e-09
Internal
sp_v3.0_unigene197012 SustainPine v3.0 218
• AutoFact: Putative receptor protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=Q8S3P8_ORYSJ 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.084e-12
Internal
sp_v3.0_unigene197949 SustainPine v3.0 195
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative uncharacterized protein At2g27790 3.52e-10
N-terminus
sp_v3.0_unigene198236 SustainPine v3.0 544
• AutoFact: transcription elongation factor TFIIS [Schizosaccharomyces pombe 972h-] sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName: Full=TFIIS gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe] emb|CAC 9.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene198904 SustainPine v3.0 469
• AutoFact: Unassigned protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain