Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene187406 SustainPine v3.0 469
AutoFact: peptide transporter [Hakea actites] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: POT family protein, expressed 6.665e-20
C-terminus
sp_v3.0_unigene187669 SustainPine v3.0 214
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.124e-16
Internal
sp_v3.0_unigene187919 SustainPine v3.0 408
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene187948 SustainPine v3.0 323
AutoFact: RVT_2 domain containing protein 5.0e-22
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene187950 SustainPine v3.0 291
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 1.0e-14
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 45; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 45 6.271e-09
C-terminus
sp_v3.0_unigene188107 SustainPine v3.0 327
AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QQD0_ORYSJ 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene188400 SustainPine v3.0 542
AutoFact: Centrin [Paramecium tetraurelia strain d4-2] ref|XP_001422974.1| hypothetical protein [Paramecium tetraurelia strain d4-2] emb|CAH03655.1| Centrin, putative [Paramecium tetraurelia] emb|CAI38936.1| centrin-related-protein,putative [Paramecium tetraurelia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Centrin 1.916e-31
Putative Complete
sp_v3.0_unigene188442 SustainPine v3.0 411
AutoFact: 60S ribosomal protein L13, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MU72_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 7.865e-21
N-terminus
sp_v3.0_unigene188519 SustainPine v3.0 775
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene188633 SustainPine v3.0 423
AutoFact: zf-CCCH domain containing protein 7.0e-05
FL-Next: sp=Zinc finger CCCH domain-containing protein 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene188643 SustainPine v3.0 349
AutoFact: LSM domain-containing protein n=1 Tax=Glomerella graminicola M1.001 RepID=E3Q2L4_COLGM 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene188770 SustainPine v3.0 276
AutoFact: Anthocyanidin 5,3-O-glucosyltransferase n=3 Tax=Rosa hybrid cultivar RepID=ANGLT_ROSHC 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Anthocyanidin 5,3-O-glucosyltransferase 1.722e-25
Internal
sp_v3.0_unigene189124 SustainPine v3.0 802
AutoFact: peroxidase 56 [Arabidopsis thaliana] sp|Q9LXG3.1|PER56_ARATH RecName: Full=Peroxidase 56; Short=Atperox P56; AltName: Full=ATP33; Flags: Precursor emb|CAB89328.1| prx10 peroxidase-like protein [Arabidopsis thaliana] gb|AAL59994.1| putative prx10 peroxidas 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxidase 1.846e-25
C-terminus
sp_v3.0_unigene189283 SustainPine v3.0 621
AutoFact: CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] emb|CAB75492.1| putative protein [Arabidopsis thaliana] gb|AEE78053.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene189340 SustainPine v3.0 404
AutoFact: Jun multi-domain protein 1.0e-05
coding
sp_v3.0_unigene189488 SustainPine v3.0 834
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI6_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene189528 SustainPine v3.0 488
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TEA8_PHYPA 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 3.359e-26
N-terminus
sp_v3.0_unigene189573 SustainPine v3.0 492
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 4.0e-30
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 1.242e-07
C-terminus
sp_v3.0_unigene189625 SustainPine v3.0 602
AutoFact: Small nuclear ribonucleoprotein F n=3 Tax=Pleosporineae RepID=B2VQW0_PYRTR 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene189640 SustainPine v3.0 444
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain