Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene5747 SustainPine v3.0 5568
• AutoFact: Phosphorylase n=1 Tax=Picea sitchensis RepID=A9NUV6_PICSI 0.0
• FL-Next: sp=Phosphorylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphorylase 0.0
Complete
sp_v3.0_unigene5758 SustainPine v3.0 1284
• AutoFact: SAP domain-containing protein [Arabidopsis thaliana] gb|AED97751.1| SAP domain-containing protein [Arabidopsis thaliana] 7.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5774 SustainPine v3.0 1010
• AutoFact: Putative thiol-disulfide oxidoreductase DCC n=1 Tax=Arabidopsis thaliana RepID=Q9LR85_ARATH 1.99993e-41
• FL-Next: sp=DCC family protein At1g52590, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene5780 SustainPine v3.0 2249
• AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor protein kinase-like 1.032e-13
Complete
sp_v3.0_unigene5794 SustainPine v3.0 1845
• AutoFact: putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] gb|EAY76689.1| hypothetical protein OsI_04643 [Oryza sativa Indica Group] gb|EAZ14353.1| hypothetical p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA-binding region-containing protein, putative 4.112e-15
Putative Complete
sp_v3.0_unigene5879 SustainPine v3.0 1905
• AutoFact: Heterogeneous nuclear ribonucleoprotein 27C, putative n=1 Tax=Ricinus communis RepID=B9SSS5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heterogeneous nuclear ribonucleoprotein 27C, putative 5.805e-16
Complete
sp_v3.0_unigene5897 SustainPine v3.0 3762
• AutoFact: RNA-binding protein MEI2, putative; 36123-32976 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AML1 7.558e-26
Complete
sp_v3.0_unigene5905 SustainPine v3.0 791
• AutoFact: putative methylase [Arabidopsis thaliana] gb|AAO64787.1| At4g28830 [Arabidopsis thaliana] dbj|BAE99501.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85551.1| putative methylase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene5952 SustainPine v3.0 2053
• AutoFact: methyltransferase / nucleic acid binding protein [Arabidopsis thaliana] gb|AAK25997.1|AF360287_1 unknown protein [Arabidopsis thaliana] dbj|BAB02202.1| unnamed protein product [Arabidopsis thaliana] gb|AAK93720.1| unknown protein [Arabidopsis thaliana] gb 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5964 SustainPine v3.0 1541
• AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Wall-associated kinase, putative 4.237e-20
Putative Complete
sp_v3.0_unigene5994 SustainPine v3.0 2012
• AutoFact: Peptide transporter n=1 Tax=Hakea actites RepID=A6YJX4_9MAGN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptide transporter, putative 1.108e-23
Complete
sp_v3.0_unigene6018 SustainPine v3.0 1522
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T6M4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptide transporter, putative 1.305e-27
C-terminus
sp_v3.0_unigene6019 SustainPine v3.0 1620
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 n=3 Tax=Arabidopsis RepID=RH42_ARATH 3.0e-21
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene6039 SustainPine v3.0 1838
• AutoFact: DNA-damage repair protein drt111, putative n=1 Tax=Ricinus communis RepID=B9SB37_RICCO 0.0
• FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Splicing factor 45 4.622e-09
Complete
sp_v3.0_unigene6041 SustainPine v3.0 1316
• AutoFact: Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 n=4 Tax=Oryza sativa RepID=CCDA1_ORYSJ 0.0
• FL-Next: sp=Cytochrome c-type biogenesis ccda-like chloroplastic protein 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: C-type cytochrome biogenesis protein 7.361e-14
C-terminus
sp_v3.0_unigene6045 SustainPine v3.0 1706
• AutoFact: putative arginine/serine-rich splicing factor [Medicago sativa subsp. x varia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor, arginine/serine-rich 2 7.149e-16
Complete
sp_v3.0_unigene6059 SustainPine v3.0 2170
• AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH 7.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein At3g13224 1.284e-08
Putative Complete
sp_v3.0_unigene6086 SustainPine v3.0 913
• AutoFact: RNA-directed RNA polymerase-like, putative n=3 Tax=Solanum demissum RepID=Q6L447_SOLDE 3.0e-26
• FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: RNA-directed RNA polymerase 9.005e-08
C-terminus
sp_v3.0_unigene6149 SustainPine v3.0 2115
• AutoFact: Equilibrative nucleoside transporter (Fragment) n=1 Tax=Populus trichocarpa RepID=B9INU8_POPTR 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Equilibrative nucleoside transporter 1.062e-25
Complete
sp_v3.0_unigene6169 SustainPine v3.0 2912
• AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IKW9_POPTR 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 1.459e-23
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain