Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ligases, Forming carbon-nitrogen bonds, Acid--D-amino-acid ligases (peptide synthases).

Term: EC:6.3.2.-  Help

Source: EC from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene249 SustainPine v3.0 1114
• AutoFact: Arm domain containing protein 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 2.876e-11
C-terminus
sp_v3.0_unigene402 SustainPine v3.0 1307
• AutoFact: SUMO-conjugating enzyme UBC9 n=2 Tax=Arabidopsis thaliana RepID=F4JKF3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene583 SustainPine v3.0 1993
• AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_203, whole genome shotgun sequence 1.108e-08
Complete
sp_v3.0_unigene1529 SustainPine v3.0 1480
• AutoFact: Auxin-regulated protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCH6_CUCME 0.0
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 3.776e-17
C-terminus
sp_v3.0_unigene1575 SustainPine v3.0 2462
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone ubiquitination proteins group 1.374e-08
Complete
sp_v3.0_unigene1940 SustainPine v3.0 1268
• AutoFact: TPA_exp: E3 ubiquitin ligase [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 1.404e-08
C-terminus
sp_v3.0_unigene1965 SustainPine v3.0 1793
• AutoFact: U-box domain-containing protein 13 [Arabidopsis thaliana] sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box domain-containing protein 13; AltName: Full=Plant U-box protein 13 emb|CAB62321.1| arm repeat containing protein homolog [Arabidopsis thaliana] gb|AAK687 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein 11 5.098e-10
Complete
sp_v3.0_unigene2030 SustainPine v3.0 2072
• AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Vitis vinifera RepID=D7TND2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene2273 SustainPine v3.0 1115
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NTD0_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2817 SustainPine v3.0 2892
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SG36_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase PUB14, putative 5.127e-12
Complete
sp_v3.0_unigene3281 SustainPine v3.0 1521
• AutoFact: Ubiquitin carrier protein n=13 Tax=Tracheophyta RepID=Q69JN7_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4020 SustainPine v3.0 976
• AutoFact: putative auxin-regulated protein [Nicotiana glutinosa] 7.0e-31
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 4.828e-07
N-terminus
sp_v3.0_unigene4590 SustainPine v3.0 376
• AutoFact: Unassigned protein
• FL-Next: sp=U-box domain-containing protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene4657 SustainPine v3.0 1203
• AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase PUB14, putative 7.602e-12
C-terminus
sp_v3.0_unigene4777 SustainPine v3.0 341
• AutoFact: Arm domain containing protein 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase, putative 8.866e-10
Internal
sp_v3.0_unigene4910 SustainPine v3.0 410
• AutoFact: Ubiquitin carrier protein n=1 Tax=Populus trichocarpa RepID=B9HDK6_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative Complete
sp_v3.0_unigene4952 SustainPine v3.0 596
• AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Vitis vinifera RepID=D7SPI7_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus
sp_v3.0_unigene4989 SustainPine v3.0 383
• AutoFact: GH3 n=1 Tax=Dimocarpus longan RepID=E2FHL1_9ROSI 1.0e-26
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 9.251e-11
Putative N-terminus
sp_v3.0_unigene5933 SustainPine v3.0 1675
• AutoFact: KAP multi-domain protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase 2.712e-06
C-terminus
sp_v3.0_unigene6840 SustainPine v3.0 1784
• AutoFact: RecName: Full=Protein spotted leaf 11; AltName: Full=Cell death-related protein SPL11 sp|Q0IMG9.2|SL11_ORYSJ RecName: Full=E3 ubiquitin-protein ligase SPL11; AltName: Full=Cell death-related protein SPL11; AltName: Full=Protein spotted leaf 11 gb|AAT94160 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 1.711e-06
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain