Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene210261 SustainPine v3.0 518
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Putative Complete
sp_v3.0_unigene210264 SustainPine v3.0 531
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 5.0e-24
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2B 1.621e-34
C-terminus
sp_v3.0_unigene210266 SustainPine v3.0 1048
AutoFact: Auxin response factor-like protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBL7_CUCME 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 1.624e-34
Putative N-terminus
sp_v3.0_unigene210278 SustainPine v3.0 1180
AutoFact: R2R3-Myb5 transcription factor (Fragment) n=2 Tax=Pinus RepID=B1PPT8_PINPS 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: R2R3-Myb5 transcription factor 0.0
Putative Complete
sp_v3.0_unigene210319 SustainPine v3.0 516
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 5.0e-34
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative histone H4 0.0
Complete
sp_v3.0_unigene210349 SustainPine v3.0 760
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 4.99997e-41
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene210362 SustainPine v3.0 1611
AutoFact: aspartyl protease-like protein [Arabidopsis thaliana] gb|AAP21262.1| At2g03200 [Arabidopsis thaliana] dbj|BAE99983.1| putative chloroplast nucleoid DNA binding protein [Arabidopsis thaliana] gb|AEC05674.1| aspartyl protease-like protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aspartic proteinase nepenthesin-1, putative 1.011e-10
Putative Complete
sp_v3.0_unigene210367 SustainPine v3.0 1129
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-34
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative histone H1 0.0
Complete
sp_v3.0_unigene210488 SustainPine v3.0 259
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.719e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain