Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene208316 SustainPine v3.0 511
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene208396 SustainPine v3.0 350
AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 2.122e-07
Internal
sp_v3.0_unigene208422 SustainPine v3.0 852
AutoFact: DUF822 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative mature anther-specific protein LAT61 3.495e-08
N-terminus
sp_v3.0_unigene208429 SustainPine v3.0 691
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 7.795e-33
Putative Complete
sp_v3.0_unigene208457 SustainPine v3.0 370
AutoFact: Histone H3 (Fragment) n=1 Tax=Solenopsis invicta RepID=E9IYV7_SOLIN 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 1.7264e-42
Putative Complete
sp_v3.0_unigene208485 SustainPine v3.0 449
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HMG1/2-like protein 1.256e-21
Putative Complete
sp_v3.0_unigene208525 SustainPine v3.0 955
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 3.50325e-44
C-terminus
sp_v3.0_unigene208540 SustainPine v3.0 852
AutoFact: IQ-domain 6 protein [Arabidopsis thaliana] gb|AAC14531.1| putative SF16 protein {Helianthus annuus} [Arabidopsis thaliana] gb|ABM06004.1| At2g26180 [Arabidopsis thaliana] gb|AEC07805.1| IQ-domain 6 protein [Arabidopsis thaliana] 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein 2.259e-26
Putative N-terminus
sp_v3.0_unigene208549 SustainPine v3.0 646
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Putative Complete
sp_v3.0_unigene208565 SustainPine v3.0 565
AutoFact: Flavonoid 3-hydroxylase, putative n=1 Tax=Ricinus communis RepID=B9S5P8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3'-hydroxylase 7.873e-33
Putative C-terminus
sp_v3.0_unigene208570 SustainPine v3.0 913
AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protein kinase, putative 2.929e-15
N-terminus
sp_v3.0_unigene208585 SustainPine v3.0 544
AutoFact: Exportin n=1 Tax=Cucumis melo subsp. melo RepID=E5GCF5_CUCME 1.99965e-42
FL-Next: tr=Exportin; Cucumis melo subsp. melo. 0.0
Putative N-terminus
sp_v3.0_unigene208593 SustainPine v3.0 481
AutoFact: Zinc finger CCCH domain-containing protein 37 n=3 Tax=Arabidopsis RepID=C3H37_ARATH 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene208621 SustainPine v3.0 575
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.444e-28
Internal
sp_v3.0_unigene208653 SustainPine v3.0 291
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene208671 SustainPine v3.0 588
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aspartic proteinase nepenthesin-1 2.414e-17
Internal
sp_v3.0_unigene208683 SustainPine v3.0 407
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 5.60519e-45
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.514e-08
Internal
sp_v3.0_unigene208803 SustainPine v3.0 190
AutoFact: Probable nucleolar protein 5-2 n=2 Tax=Arabidopsis RepID=NOP5B_ARATH 3.0e-18
FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleolar RNA binding protein 6.195e-09
Internal
sp_v3.0_unigene208845 SustainPine v3.0 190
AutoFact: Unassigned protein
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene208868 SustainPine v3.0 124
AutoFact: Ku P80 DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RDD3_RICCO 2.0e-09
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain