Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5406 SustainPine v3.0 2413
AutoFact: aarF domain-containing kinase [Arabidopsis thaliana] gb|AAK95302.1|AF410316_1 AT3g24190/MUJ8_17 [Arabidopsis thaliana] dbj|BAB01360.1| unnamed protein product [Arabidopsis thaliana] gb|AAM47311.1| AT3g24190/MUJ8_17 [Arabidopsis thaliana] gb|AEE76870.1| aa 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted unusual protein kinase (ISS) 3.404e-07
Putative Complete
sp_v3.0_unigene5409 SustainPine v3.0 1167
AutoFact: MIP-T3 multi-domain protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5452 SustainPine v3.0 1388
AutoFact: transcription factor bHLH66 [Arabidopsis thaliana] sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH 66; AltName: Full=Transcription factor EN 95; AltName: Full=b 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.921e-21
C-terminus
sp_v3.0_unigene5453 SustainPine v3.0 1635
AutoFact: putative multiple stress-responsive zinc-finger protein [Citrus hybrid cultivar] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger A20 and AN1 domains-containing protein 2.649e-15
Complete
sp_v3.0_unigene5462 SustainPine v3.0 1439
AutoFact: peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|AAL08294.1| AT4g17070/dl4565c [Arabidopsis thaliana] gb|AAN28830.1| At4g17070/dl4565c [Arabidopsis thaliana] gb|AEE83845.1| peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene5468 SustainPine v3.0 3217
AutoFact: zinc finger CCCH domain-containing protein 18 [Arabidopsis thaliana] sp|Q9SJ41.1|C3H18_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 18; Short=AtC3H18 gb|AAD29054.1| hypothetical protein [Arabidopsis thaliana] gb|AEC05899.1| zinc finger C 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene5472 SustainPine v3.0 2743
AutoFact: oligopeptidase B [Arabidopsis thaliana] gb|AAD50051.1|AC007980_16 Similar to oligopeptidases [Arabidopsis thaliana] gb|AAL84967.1| At1g50380/F14I3_27 [Arabidopsis thaliana] gb|AEE32542.1| oligopeptidase B [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Oligopeptidase B, putative 2.694e-08
Putative Complete
sp_v3.0_unigene5478 SustainPine v3.0 1650
AutoFact: Putative ammonium transporter AMT2 n=3 Tax=Cupressaceae RepID=Q0EEW6_CRYJA 0.0
FL-Next: tr=Putative ammonium transporter AMT2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Ammonium transporter 3.36101e-41
Complete
sp_v3.0_unigene5504 SustainPine v3.0 1404
AutoFact: DNA-3-methyladenine glycosylase II [Arabidopsis thaliana] emb|CAB42917.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] dbj|BAC43662.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] gb|AAO63339.1| At3g50880 [Arabidopsis 0.0
FL-Next: tr=HhH-GPD base excision DNA repair family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: DNA-3-methyladenine glycosylase, putative 1.014e-07
Complete
sp_v3.0_unigene5549 SustainPine v3.0 2259
AutoFact: ARID multi-domain protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene5582 SustainPine v3.0 3130
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cytosolic tRNA-Ala synthetase 3.385e-08
Putative Complete
sp_v3.0_unigene5599 SustainPine v3.0 2280
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RMJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein GT-1 3.335e-09
Complete
sp_v3.0_unigene5609 SustainPine v3.0 2223
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 1.157e-06
C-terminus
sp_v3.0_unigene5645 SustainPine v3.0 2645
AutoFact: CRK1 protein n=1 Tax=Beta vulgaris subsp. vulgaris RepID=Q9LDC1_BETVU 0.0
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: CDKC 3.81e-12
Complete
sp_v3.0_unigene5650 SustainPine v3.0 2257
AutoFact: putative BRCT domain-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Brca1 associated ring domain, putative 5.669e-09
C-terminus
sp_v3.0_unigene5710 SustainPine v3.0 2439
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene5718 SustainPine v3.0 1344
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene5741 SustainPine v3.0 3023
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Squamosa promoter-binding protein, putative 6.47e-16
Complete
sp_v3.0_unigene5747 SustainPine v3.0 5568
AutoFact: Phosphorylase n=1 Tax=Picea sitchensis RepID=A9NUV6_PICSI 0.0
FL-Next: sp=Phosphorylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphorylase 0.0
Complete
sp_v3.0_unigene5806 SustainPine v3.0 1838
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.898e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain