Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene209687 SustainPine v3.0 588
• AutoFact: Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ZF-HD homeobox protein 4.7e-16
Putative Complete
sp_v3.0_unigene209691 SustainPine v3.0 823
• AutoFact: Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 7.451e-11
C-terminus
sp_v3.0_unigene209704 SustainPine v3.0 1115
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NKR6_PICSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene209729 SustainPine v3.0 496
• AutoFact: putative MADS box transcription factor PrMADS9 [Pinus radiata] 8.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box transcription factor 5.914e-14
N-terminus
sp_v3.0_unigene209756 SustainPine v3.0 194
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 6.0e-11
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene209800 SustainPine v3.0 277
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 4.5e-08
Internal
sp_v3.0_unigene209812 SustainPine v3.0 321
• AutoFact: histone H4 [Hyacinthus orientalis] 8.0e-28
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H4 0.0
Putative Complete
sp_v3.0_unigene209829 SustainPine v3.0 543
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 6.0e-25
• FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.252e-28
N-terminus
sp_v3.0_unigene209843 SustainPine v3.0 517
• AutoFact: Endo-1,3-1,4-beta-d-glucanase, putative n=1 Tax=Ricinus communis RepID=B9RSS4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Endo-1,3-1,4-beta-d-glucanase, putative 2.528e-17
N-terminus
sp_v3.0_unigene209849 SustainPine v3.0 677
• AutoFact: basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] ref|XP_002893369.1| hypothetical protein ARALYDRAFT_472704 [Arabidopsis lyrata subsp. lyrata] dbj|BAC43682.1| unknown protein [Arabidopsis thaliana] gb|AAO42932.1| At1g26948 [Arabidop 7.0e-24
• FL-Next: sp=Transcription factor bHLH135; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcription regulator, putative 9.213e-11
Complete
sp_v3.0_unigene209865 SustainPine v3.0 633
• AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene210017 SustainPine v3.0 247
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 7.8e-30
Putative N-terminus
sp_v3.0_unigene210054 SustainPine v3.0 731
• AutoFact: heat shock factor RHSF1 [Oryza sativa Japonica Group] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat stress transcription factor A-6a 6.214e-08
Internal
sp_v3.0_unigene210063 SustainPine v3.0 173
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 7.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.091e-29
C-terminus
sp_v3.0_unigene210116 SustainPine v3.0 417
• AutoFact: Ethylene-insensitive 3d n=2 Tax=Populus trichocarpa RepID=B9HK87_POPTR 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ethylene signal transcription factor 1.312e-15
N-terminus
sp_v3.0_unigene210135 SustainPine v3.0 388
• AutoFact: MYB transcription factor MYB92 [Glycine max] 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB1 5.923e-11
Putative N-terminus
sp_v3.0_unigene210151 SustainPine v3.0 897
• AutoFact: R2R3-MYB transcription factor n=1 Tax=Pinus taeda RepID=Q6V0J3_PINTA 0.0
• FL-Next: tr=R2R3-MYB transcription factor; Pinus taeda (Loblolly pine). 0.0
• Sma3: R2R3-MYB transcription factor 0.0
N-terminus
sp_v3.0_unigene210157 SustainPine v3.0 279
• AutoFact: 60S ribosomal protein L40 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KFB8_PUCGT 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene210161 SustainPine v3.0 284
• AutoFact: Unassigned protein
• FL-Next: sp=Trihelix transcription factor GTL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene210169 SustainPine v3.0 581
• AutoFact: Putative U2 snRNP auxiliary factor (Fragment) n=1 Tax=Chenopodium rubrum RepID=Q1H8Q9_CHERU 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: U2 snrnp auxiliary factor, small subunit, putative 3.277e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain