Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene209306 SustainPine v3.0 473
• AutoFact: Trypan_PARP multi-domain protein 4.0e-17
• Sma3: Putative glycine rich protein 5.722e-25
coding
sp_v3.0_unigene209335 SustainPine v3.0 763
• AutoFact: 78 kDa glucose-regulated protein precursor [Neurospora crassa OR74A] sp|P78695.3|GRP78_NEUCR RecName: Full=78 kDa glucose-regulated protein homolog; Short=GRP-78; AltName: Full=Immunoglobulin heavy chain-binding protein homolog; Short=BiP; Flags: Precurso 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
C-terminus
sp_v3.0_unigene209336 SustainPine v3.0 574
• AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 6.598e-23
Complete
sp_v3.0_unigene209368 SustainPine v3.0 201
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9IKF6_POPTR 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 1.242e-17
N-terminus
sp_v3.0_unigene209437 SustainPine v3.0 614
• AutoFact: ERD sugar transporter-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF13_PICSI 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_164, whole genome shotgun sequence 9.678e-34
C-terminus
sp_v3.0_unigene209448 SustainPine v3.0 944
• AutoFact: F-box protein 7 [Arabidopsis thaliana] sp|Q9XI00.1|SKI32_ARATH RecName: Full=F-box protein 7; AltName: Full=SKP1-interacting partner 32 gb|AAD41431.1|AC007727_20 Contains PF|00646 F-box domain. ESTs gb|Z37267, gb|R90412, gb|Z37268 and gb|T88189 come from 0.0
• FL-Next: sp=F-box protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene209455 SustainPine v3.0 446
• AutoFact: Putative MADS domain transcription factor GGM11 n=1 Tax=Gnetum gnemon RepID=Q9XGJ6_GNEGN 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 2.68e-19
N-terminus
sp_v3.0_unigene209501 SustainPine v3.0 764
• AutoFact: phosphatase SGT1b [Arabidopsis thaliana] sp|Q9SUT5.1|SGT1B_ARATH RecName: Full=Protein SGT1 homolog B; Short=AtSGT1b; AltName: Full=Protein ENHANCED DOWNY MILDEW 1; AltName: Full=Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 3; AltName: Full=Suppressor of G 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SGT1-like protein 4.588e-14
Putative Complete
sp_v3.0_unigene209526 SustainPine v3.0 747
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 5.16e-20
C-terminus
sp_v3.0_unigene209536 SustainPine v3.0 434
• AutoFact: Calcium binding protein with EF-hand motif (Fragment) n=4 Tax=Pseudotsuga RepID=C6F9S2_PSEMZ 6.0e-26
• FL-Next: sp=Calcium-binding protein KIC; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ccd1, putative 1.008e-15
Complete
sp_v3.0_unigene209543 SustainPine v3.0 364
• AutoFact: KRTAP multi-domain protein 1.0e-07
unknown
sp_v3.0_unigene209554 SustainPine v3.0 723
• AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 4.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene209563 SustainPine v3.0 577
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.00054e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene209573 SustainPine v3.0 655
• AutoFact: Histone domain containing protein 2.0e-14
• Sma3: Histone H2A 0.0
coding
sp_v3.0_unigene209585 SustainPine v3.0 933
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.041e-19
N-terminus
sp_v3.0_unigene209587 SustainPine v3.0 1177
• AutoFact: peroxidase prx12 precursor [Spinacia oleracea] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative peroxidase 7.094e-37
C-terminus
sp_v3.0_unigene209640 SustainPine v3.0 463
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent RNA helicase, putative 9.031e-10
Putative C-terminus
sp_v3.0_unigene209650 SustainPine v3.0 296
• AutoFact: putative MADS box transcription factor PrMADS9 [Pinus radiata] 7.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 1.437e-12
N-terminus
sp_v3.0_unigene209672 SustainPine v3.0 825
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene209684 SustainPine v3.0 330
• AutoFact: ABA_WDS domain containing protein 9.0e-12
• Sma3: Asr2 2.242e-08
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain