Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3408 SustainPine v3.0 2648
AutoFact: Receptor serine-threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RT11_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor serine-threonine protein kinase, putative 8.898e-32
Complete
sp_v3.0_unigene3412 SustainPine v3.0 2810
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein, putative 2.768e-08
Complete
sp_v3.0_unigene3419 SustainPine v3.0 2493
AutoFact: NUC153 multi-domain protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3431 SustainPine v3.0 708
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_818.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TRX8_VITVI 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosome associated protein-like 3.954e-09
Putative C-terminus
sp_v3.0_unigene3436 SustainPine v3.0 1682
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX11; AltName: Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain transcription factor HOX11; AltName: Full=OsHox11 dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa Japonica 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3439 SustainPine v3.0 1860
AutoFact: Aprataxin, putative n=1 Tax=Ricinus communis RepID=B9SWY0_RICCO 0.0
FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene3444 SustainPine v3.0 3832
AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Associated with HOX family protein, expressed 6.029e-15
Complete
sp_v3.0_unigene3463 SustainPine v3.0 1474
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 0.0
FL-Next: sp=WUSCHEL-related homeobox 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative wuschel homeobox protein 5.629e-07
Complete
sp_v3.0_unigene3467 SustainPine v3.0 2205
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene3477 SustainPine v3.0 2892
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 37; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene3491 SustainPine v3.0 938
AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 0.0
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 3.515e-38
Putative Complete
sp_v3.0_unigene3501 SustainPine v3.0 1983
AutoFact: protein kinase [Triticum aestivum] dbj|BAD19067.1| protein kinase [Triticum aestivum] dbj|BAD21354.1| WNdr1A-like protein kinase [Triticum monococcum subsp. aegilopoides] dbj|BAD21355.1| WNdr1B-like protein kinase [Aegilops speltoides] dbj|BAD21356.1| WNd 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein kinase 5.03e-15
Complete
sp_v3.0_unigene3502 SustainPine v3.0 2477
AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 4.206e-17
Complete
sp_v3.0_unigene3506 SustainPine v3.0 2695
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr3 scaffold_8, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene3509 SustainPine v3.0 695
AutoFact: R2R3-MYB transcription factor MYB16 (Fragment) n=1 Tax=Pinus taeda RepID=C0JTE0_PINTA 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: R2R3-MYB transcription factor MYB16 1.796e-10
C-terminus
sp_v3.0_unigene3519 SustainPine v3.0 1669
AutoFact: putative adhesion regulating molecule family [Oryza sativa Japonica Group] dbj|BAG90710.1| unnamed protein product [Oryza sativa Japonica Group] dbj|BAG86665.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC79799.1| hypothetical protein OsI_ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3527 SustainPine v3.0 2044
AutoFact: double-strand break repair protein MRE11 [Arabidopsis thaliana] sp|Q9XGM2.1|MRE11_ARATH RecName: Full=Double-strand break repair protein MRE11 emb|CAB50793.1| Mre11 protein [Arabidopsis thaliana] dbj|BAB10749.1| DNA repair and meiosis protein Mre11 [Arabi 0.0
FL-Next: sp=Double-strand break repair protein MRE11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Double-strand break repair protein MRE11 7.997e-09
C-terminus
sp_v3.0_unigene3535 SustainPine v3.0 3375
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Global transcription factor group 7.085e-14
Complete
sp_v3.0_unigene3537 SustainPine v3.0 2195
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative ankyrin-kinase 2.36e-18
Complete
sp_v3.0_unigene3548 SustainPine v3.0 905
AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 0.0
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain