Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3104 SustainPine v3.0 3831
AutoFact: initiator-binding protein [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene3107 SustainPine v3.0 3631
AutoFact: Calmodulin-binding protein n=2 Tax=Solanum lycopersicum RepID=E5D5L1_SOLLC 0.0
FL-Next: sp=Calmodulin-binding transcription activator 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Calmodulin-binding transcription activator (Camta), plants, putative 9.613e-15
C-terminus
sp_v3.0_unigene3130 SustainPine v3.0 1552
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Extensin-like protein 5.36e-31
N-terminus
sp_v3.0_unigene3135 SustainPine v3.0 2861
AutoFact: Phosphatidylinositol 3- and 4-kinase, catalytic [Medicago truncatula] 0.0
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphatidylinositol 3-and 4-kinase family-like 1.244e-07
Complete
sp_v3.0_unigene3136 SustainPine v3.0 3007
AutoFact: Med15 domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transparent testa 1 2.751e-08
Complete
sp_v3.0_unigene3141 SustainPine v3.0 1123
AutoFact: methyl-CPG-binding domain 9 [Arabidopsis thaliana] sp|Q9SGH2.1|MBD9_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 9; Short=AtMBD9; Short=MBD09; AltName: Full=Histone acetyl tranferase MBD9; AltName: Full=Methyl-CpG-binding protein MBD9 5.60519e-45
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene3164 SustainPine v3.0 4013
AutoFact: Phospholipid-transporting atpase, putative n=1 Tax=Ricinus communis RepID=B9SRT5_RICCO 0.0
FL-Next: sp=Phospholipid-transporting ATPase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Aminophospholipid ATPase 1.662e-16
C-terminus
sp_v3.0_unigene3177 SustainPine v3.0 1741
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.555e-16
Putative Complete
sp_v3.0_unigene3189 SustainPine v3.0 3992
AutoFact: Nop14 multi-domain protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3196 SustainPine v3.0 2305
AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor 25 8.568e-15
Complete
sp_v3.0_unigene3199 SustainPine v3.0 2017
AutoFact: Dof zinc finger protein DOF5.2 [Arabidopsis thaliana] ref|NP_851106.1| Dof zinc finger protein DOF5.2 [Arabidopsis thaliana] sp|Q93ZL5.2|DOF52_ARATH RecName: Full=Dof zinc finger protein DOF5.2; Short=AtDOF5.2 gb|AAU90081.1| At5g39660 [Arabidopsis thalian 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F-box family protein 3.157e-29
C-terminus
sp_v3.0_unigene3202 SustainPine v3.0 2052
AutoFact: DNA repair metallo-beta-lactamase n=1 Tax=Medicago truncatula RepID=Q2HRV5_MEDTR 0.0
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA cross-link repair protein pso2/snm1, putative 6.883e-09
Complete
sp_v3.0_unigene3203 SustainPine v3.0 1068
AutoFact: RAD-like 6 protein [Arabidopsis thaliana] gb|ABD24442.1| RAD-like protein 6 [Arabidopsis thaliana] gb|AEE35694.1| RAD-like 6 protein [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RADIALIS 4.403e-15
Complete
sp_v3.0_unigene3225 SustainPine v3.0 2498
AutoFact: Milkweed pod1 n=1 Tax=Zea mays RepID=B5LZ60_MAIZE 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transfactor 8.665e-09
Complete
sp_v3.0_unigene3232 SustainPine v3.0 1107
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein LSD1-LIKE 2 1.869e-08
C-terminus
sp_v3.0_unigene3243 SustainPine v3.0 2359
AutoFact: neutral invertase [Vitis vinifera] 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: Beta-fructofuranosidase, putative 6.777e-30
Putative Complete
sp_v3.0_unigene3246 SustainPine v3.0 1063
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SZ00_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 2.232e-17
C-terminus
sp_v3.0_unigene3247 SustainPine v3.0 765
AutoFact: complex II (EC:1.3.5.1) 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3259 SustainPine v3.0 1762
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.094e-39
C-terminus
sp_v3.0_unigene3262 SustainPine v3.0 2362
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S2T6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 2.223e-16
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain