Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1940 SustainPine v3.0 1268
AutoFact: TPA_exp: E3 ubiquitin ligase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spotted leaf protein, putative 1.404e-08
C-terminus
sp_v3.0_unigene1943 SustainPine v3.0 2051
AutoFact: MAR-binding protein [Nicotiana tabacum] 0.0
FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleolar protein nop56, putative 1.106e-11
N-terminus
sp_v3.0_unigene1944 SustainPine v3.0 1277
AutoFact: Gibberellin receptor GID1-like protein n=2 Tax=Physcomitrella patens RepID=A9LY13_9BRYO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative esterase 4.096e-14
Complete
sp_v3.0_unigene1965 SustainPine v3.0 1793
AutoFact: U-box domain-containing protein 13 [Arabidopsis thaliana] sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box domain-containing protein 13; AltName: Full=Plant U-box protein 13 emb|CAB62321.1| arm repeat containing protein homolog [Arabidopsis thaliana] gb|AAK687 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spotted leaf protein 11 5.098e-10
Complete
sp_v3.0_unigene1967 SustainPine v3.0 1085
AutoFact: Gly_rich multi-domain protein 4.0e-17
Sma3: Glycine-rich protein 4.555e-14
coding
sp_v3.0_unigene1971 SustainPine v3.0 2114
AutoFact: Cyclin B1-2 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CycB1 1.626e-18
Complete
sp_v3.0_unigene1977 SustainPine v3.0 2547
AutoFact: Sentrin/sumo-specific protease, putative n=1 Tax=Ricinus communis RepID=B9SH87_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1986 SustainPine v3.0 1649
AutoFact: Nudix hydrolase 13 n=3 Tax=Andropogoneae RepID=B6SQG1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Diphosphoinositol polyphosphate phosphohydrolase, putative 2.356e-19
Complete
sp_v3.0_unigene1991 SustainPine v3.0 2194
AutoFact: transcription factor DcMYB2 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 3.78351e-44
Complete
sp_v3.0_unigene1992 SustainPine v3.0 2754
AutoFact: Embryonic flower 2 n=1 Tax=Yucca filamentosa RepID=Q1W6L0_YUCFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Embryonic flower 2 2.227e-24
Complete
sp_v3.0_unigene2007 SustainPine v3.0 3104
AutoFact: kinesin 3 [Arabidopsis thaliana] sp|P46875.1|ATK3_ARATH RecName: Full=Kinesin-3; AltName: Full=Kinesin-like protein C dbj|BAA04674.1| heavy chain polypeptide of kinesin-like protein [Arabidopsis thaliana] gb|AAO24588.1| At5g54670 [Arabidopsis thaliana] db 0.0
FL-Next: sp=Kinesin-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Kinesin heavy chain, putative 2.504e-15
Complete
sp_v3.0_unigene2051 SustainPine v3.0 4296
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_51, whole genome shotgun sequence 4.581e-08
Complete
sp_v3.0_unigene2056 SustainPine v3.0 3082
AutoFact: WRKY transcription factor PmWRKY115 (Fragment) n=3 Tax=Pinus monticola RepID=E6Y3E7_PINMO 0.0
FL-Next: sp=Probable WRKY transcription factor 33; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WRKY transcription factor 6.17e-12
Complete
sp_v3.0_unigene2069 SustainPine v3.0 4239
AutoFact: type-B response regulator [Catharanthus roseus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type-b response regulator 3.809e-32
Complete
sp_v3.0_unigene2076 SustainPine v3.0 1105
AutoFact: 3-hydroxyacyl-CoA dehydratase 1 [Arabidopsis thaliana] emb|CAB10223.1| carnitine racemase like protein [Arabidopsis thaliana] emb|CAB78486.1| carnitine racemase like protein [Arabidopsis thaliana] gb|AAL62390.1| carnitine racemase like protein [Arabidopsi 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carnitine racemase, putative 1.736e-09
Complete
sp_v3.0_unigene2080 SustainPine v3.0 3187
AutoFact: EIN3-binding F-box protein 1 n=1 Tax=Solanum lycopersicum RepID=Q2PQJ0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EIN3-binding F-box protein 2 3.622e-09
Complete
sp_v3.0_unigene2092 SustainPine v3.0 2211
AutoFact: protein ELC [Arabidopsis thaliana] sp|Q9LHG8.1|ELC_ARATH RecName: Full=Protein ELC; Short=AtELC; AltName: Full=ESCRT-I complex subunit VPS23 homolog 1; AltName: Full=Vacuolar protein-sorting-associated protein 23 homolog 1 gb|AAG51025.1|AC069474_24 unknow 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2098 SustainPine v3.0 683
AutoFact: TPA_inf: WRKY transcription factor 7 [Oryza sativa (japonica cultivar-group)] gb|AAT39221.1| 'unknown protein, contains WRKY DNA -binding domain' [Oryza sativa Japonica Group] gb|ABC02807.1| WRKY transcription factor 7 [Oryza sativa] gb|EEE64508.1| hypoth 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 9.008e-23
Putative Complete
sp_v3.0_unigene2105 SustainPine v3.0 1421
AutoFact: Putative wuschel homeobox protein WOX2 n=2 Tax=Pinus RepID=C3W8A2_PINSY 0.0
FL-Next: tr=Putative wuschel homeobox protein WOX2; Pinus sylvestris (Scots pine). 0.0
Sma3: Homeodomain transcription factor 0.0
Complete
sp_v3.0_unigene2116 SustainPine v3.0 1520
AutoFact: DUF248 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin-like protein 1.256e-18
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain