Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1847 SustainPine v3.0 1903
AutoFact: CBL-interacting protein kinase 16 n=2 Tax=Vitis vinifera RepID=C4P7W5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CBL-interacting serine/threonine-protein kinase, putative 6.752e-38
Complete
sp_v3.0_unigene1854 SustainPine v3.0 4888
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AAL36370.1| unknown protein [Arabidopsis thaliana] gb|AAM20286.1| unknown protein [Arabidopsis thaliana] gb|AEE84863.1| Transcription elongation factor (TFIIS) family protein 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1867 SustainPine v3.0 2649
AutoFact: FMN-linked oxidoreductase-like protein protein n=5 Tax=Arabidopsis RepID=Q8H128_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene1868 SustainPine v3.0 2576
AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: U1 snRNP 3.506e-09
Complete
sp_v3.0_unigene1869 SustainPine v3.0 2047
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 snRNP 9.17e-09
Putative Complete
sp_v3.0_unigene1875 SustainPine v3.0 5252
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.086e-16
Complete
sp_v3.0_unigene1880 SustainPine v3.0 2920
AutoFact: protein HIRA [Zea mays] sp|Q32SG6.1|HIRA_MAIZE RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein gb|AAY24681.1| HIRA [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HIRA 2.785e-13
C-terminus
sp_v3.0_unigene1882 SustainPine v3.0 2560
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 2.322e-17
C-terminus
sp_v3.0_unigene1884 SustainPine v3.0 2761
AutoFact: Heat shock 70 kDa protein, mitochondrial n=3 Tax=rosids RepID=HSP7M_PHAVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
Complete
sp_v3.0_unigene1887 SustainPine v3.0 2829
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: DNA polymerase 1.099e-23
C-terminus
sp_v3.0_unigene1888 SustainPine v3.0 2212
AutoFact: protein kinase-like protein [Arabidopsis thaliana] sp|Q5XF57.1|Y5576_ARATH RecName: Full=Probable receptor-like serine/threonine-protein kinase At5g57670 gb|AAU90049.1| At5g57670 [Arabidopsis thaliana] gb|AAW30041.1| At5g57670 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 1.478e-19
Complete
sp_v3.0_unigene1891 SustainPine v3.0 2694
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AAA-type ATPase family protein, putative, expressed 1.969e-07
Complete
sp_v3.0_unigene1892 SustainPine v3.0 2855
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_91, whole genome shotgun sequence 1.949e-08
Complete
sp_v3.0_unigene1893 SustainPine v3.0 3240
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_267, whole genome shotgun sequence 8.644e-07
Complete
sp_v3.0_unigene1899 SustainPine v3.0 1386
AutoFact: Jasmonate O-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9R7Y1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SAMT 0.0
Complete
sp_v3.0_unigene1900 SustainPine v3.0 1096
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z5_MALDO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.677e-25
Putative C-terminus
sp_v3.0_unigene1907 SustainPine v3.0 1091
AutoFact: Transcription factor bHLH69 n=3 Tax=Arabidopsis RepID=BH069_ARATH 1.0e-21
FL-Next: sp=Transcription factor bHLH69; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BHLH transcription factor 1.798e-11
C-terminus
sp_v3.0_unigene1911 SustainPine v3.0 2927
AutoFact: Keratin_B2 multi-domain protein 1.0e-05
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene1913 SustainPine v3.0 2472
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Phytochrome A 6.172e-19
C-terminus
sp_v3.0_unigene1932 SustainPine v3.0 3083
AutoFact: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana] gb|AAP04148.1| unknown protein [Arabidopsis thaliana] dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75129.1| Cleavage and polyadenylation s 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain