Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1707 SustainPine v3.0 1286
AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 3.394e-17
Complete
sp_v3.0_unigene1708 SustainPine v3.0 889
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 5.00264e-43
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene1741 SustainPine v3.0 2868
AutoFact: cyclophilin 59 [Arabidopsis thaliana] gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1744 SustainPine v3.0 1764
AutoFact: KANADI like transcription factor n=3 Tax=Vitis vinifera RepID=C5DB44_VITVI 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Myb-like DNA-binding domain, SHAQKYF class family protein, expressed 4.962e-12
C-terminus
sp_v3.0_unigene1746 SustainPine v3.0 1416
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.378e-11
Complete
sp_v3.0_unigene1748 SustainPine v3.0 797
AutoFact: bHLH transcription factor [Brassica napus] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene1753 SustainPine v3.0 7119
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 5.128e-13
Complete
sp_v3.0_unigene1755 SustainPine v3.0 2138
AutoFact: Cyclin n=1 Tax=Adiantum capillus-veneris RepID=Q96226_ADICA 0.0
FL-Next: sp=Cyclin-A1-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclin A-like protein 8.273e-20
Complete
sp_v3.0_unigene1761 SustainPine v3.0 1934
AutoFact: Basic helix-loop-helix family protein-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZL73_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1768 SustainPine v3.0 1443
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=D5A9W9_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Complete
sp_v3.0_unigene1771 SustainPine v3.0 3231
AutoFact: PREDICTED: similar to nitrate reductase n=1 Tax=Vitis vinifera RepID=UPI00019854B3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nitrate reductase 0.0
Complete
sp_v3.0_unigene1775 SustainPine v3.0 992
AutoFact: Small heat shock protein n=1 Tax=Cyclamen persicum RepID=A4ZX74_9ERIC 8.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat-shock protein, putative 3.3e-38
Complete
sp_v3.0_unigene1776 SustainPine v3.0 3224
AutoFact: mRNA capping enzyme-like protein [Arabidopsis thaliana] gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: mRNA capping enzyme, putative 1.113e-08
Complete
sp_v3.0_unigene1778 SustainPine v3.0 1876
AutoFact: transcription factor bHLH113 [Arabidopsis thaliana] sp|Q9LT67.1|BH113_ARATH RecName: Full=Transcription factor bHLH113; AltName: Full=Basic helix-loop-helix protein 113; Short=AtbHLH113; Short=bHLH 113; AltName: Full=Transcription factor EN 61; AltName: F 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ER33 protein 1.158e-15
Complete
sp_v3.0_unigene1785 SustainPine v3.0 1152
AutoFact: rhodanese-like protein [Holcus lanatus] 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rhodanese, putative, expressed 1.39e-09
Complete
sp_v3.0_unigene1796 SustainPine v3.0 1187
AutoFact: U1 snRNP-interacting 70 kDa protein [Triticum aestivum] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 small nuclear ribonucleoprotein 5.633e-12
Complete
sp_v3.0_unigene1809 SustainPine v3.0 1238
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative N6-adenosine-methyltransferase MT-A70-like 7.31e-06
N-terminus
sp_v3.0_unigene1810 SustainPine v3.0 1955
AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 1 7.814e-13
Complete
sp_v3.0_unigene1838 SustainPine v3.0 4729
AutoFact: Cytosine-specific methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTS8_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytosine-specific methyltransferase 0.0
Complete
sp_v3.0_unigene1842 SustainPine v3.0 692
AutoFact: Calcium binding protein with EF-hand motif (Fragment) n=4 Tax=Pseudotsuga RepID=C6F9S2_PSEMZ 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ccd1, putative 1.324e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain