Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: structural constituent of ribosome

Term: GO:0003735  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4897 SustainPine v3.0 296
AutoFact: 40S ribosomal protein S7-like protein n=1 Tax=Solanum tuberosum RepID=Q3HRX6_SOLTU 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S7 5.196e-26
C-terminus
sp_v3.0_unigene4898 SustainPine v3.0 588
AutoFact: Ribosomal protein L4/L1 n=3 Tax=Agaricomycetes RepID=A8N1B9_COPC7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S16 1.955e-36
Complete
sp_v3.0_unigene4909 SustainPine v3.0 362
AutoFact: Glycoprotein-like protein n=2 Tax=core eudicotyledons RepID=Q3HVK7_SOLTU 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60 ribosomal protein L14 1.95e-12
Putative N-terminus
sp_v3.0_unigene4916 SustainPine v3.0 841
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.649e-08
Putative Complete
sp_v3.0_unigene4926 SustainPine v3.0 251
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 3.217e-11
C-terminus
sp_v3.0_unigene4931 SustainPine v3.0 734
AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5003 SustainPine v3.0 225
AutoFact: Ubiquitin [Medicago truncatula] 2.0e-26
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 1.139e-10
Putative Complete
sp_v3.0_unigene5013 SustainPine v3.0 652
AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5054 SustainPine v3.0 3611
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 1.006e-16
C-terminus
sp_v3.0_unigene5142 SustainPine v3.0 1232
AutoFact: Chaperone protein htpG family protein [Arabidopsis thaliana] gb|AAL32008.1|AF436826_1 At2g04030/F3C11.14 [Arabidopsis thaliana] gb|AAD32922.1| putative heat shock protein [Arabidopsis thaliana] gb|AAK96633.1| At2g04030/F3C11.14 [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Putative N-terminus
sp_v3.0_unigene5311 SustainPine v3.0 2501
AutoFact: 3-ketoacyl-ACP synthase [Cuphea avigera var. pulcherrima] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-ketoacyl-ACP synthase II 8.124e-17
Complete
sp_v3.0_unigene5567 SustainPine v3.0 1473
AutoFact: 50S ribosomal protein L21 n=4 Tax=Andropogoneae RepID=B6TJJ8_MAIZE 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L21 0.0
Complete
sp_v3.0_unigene5660 SustainPine v3.0 1260
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5672 SustainPine v3.0 1379
AutoFact: 50S ribosomal protein L7/L12, putative n=1 Tax=Ricinus communis RepID=B9RB19_RICCO 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L7/L12, putative 4.351e-12
Complete
sp_v3.0_unigene5698 SustainPine v3.0 1381
AutoFact: 50S ribosomal protein L4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L4 9.565e-08
Complete
sp_v3.0_unigene5899 SustainPine v3.0 1943
AutoFact: WD repeat and SOF domain-containing protein 1 [Arabidopsis thaliana] gb|AAK50083.1|AF372943_1 AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAK73982.1| AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAN28840.1| At4g28450/F20O9_130 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SOF1 protein-like protein 4.17e-09
Complete
sp_v3.0_unigene6038 SustainPine v3.0 1828
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJX0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6231 SustainPine v3.0 1128
AutoFact: mitochondrial ribosomal protein L11 [Arabidopsis thaliana] emb|CAB54877.1| ribosomal protein L11 homolog [Arabidopsis thaliana] emb|CAB80265.1| ribosomal protein L11 homolog [Arabidopsis thaliana] gb|AAM67114.1| ribosomal protein L11-like protein [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6284 SustainPine v3.0 2496
AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Trehalose-6-phosphate synthase, putative 6.342e-21
Complete
sp_v3.0_unigene6350 SustainPine v3.0 1285
AutoFact: Ribosomal protein L9/RNase H1 [Arabidopsis thaliana] dbj|BAA97147.1| unnamed protein product [Arabidopsis thaliana] gb|AAO22701.1| unknown protein [Arabidopsis thaliana] gb|AAO42390.1| unknown protein [Arabidopsis thaliana] gb|AED96300.1| Ribosomal protei 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain