Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: structural constituent of ribosome

Term: GO:0003735  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene209836 SustainPine v3.0 385
• AutoFact: 60S ribosomal protein L34-1 n=28 Tax=Magnoliophyta RepID=RL341_ARATH 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L34 2.611e-12
Putative N-terminus
sp_v3.0_unigene209852 SustainPine v3.0 739
• AutoFact: 40S ribosomal protein S29 n=4 Tax=Magnoliophyta RepID=RS29_ARATH 6.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene209937 SustainPine v3.0 190
• AutoFact: LRX2, putative n=1 Tax=Ricinus communis RepID=B9RL73_RICCO 2.0e-17
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Extensin-like protein 6.653e-09
Internal
sp_v3.0_unigene210025 SustainPine v3.0 248
• AutoFact: small subunit ribosomal protein S6 [Arabidopsis thaliana] dbj|BAB01802.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67031.1| unknown [Arabidopsis thaliana] dbj|BAC42712.1| unknown protein [Arabidopsis thaliana] gb|AAO50729.1| unknown protein [A 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene210063 SustainPine v3.0 173
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 7.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.091e-29
C-terminus
sp_v3.0_unigene210105 SustainPine v3.0 196
• AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 6.404e-15
Internal
sp_v3.0_unigene210157 SustainPine v3.0 279
• AutoFact: 60S ribosomal protein L40 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KFB8_PUCGT 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene210232 SustainPine v3.0 299
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 4.504e-15
Internal
sp_v3.0_unigene210244 SustainPine v3.0 503
• AutoFact: Heat shock protein 90-1 n=9 Tax=rosids RepID=HS901_ARATH 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene210272 SustainPine v3.0 246
• AutoFact: 40S ribosomal protein S3a-1 [Arabidopsis thaliana] sp|Q9CAV0.3|RS3A1_ARATH RecName: Full=40S ribosomal protein S3a-1 gb|AAG51414.1|AC009465_14 putative 40S ribosomal protein S3A (S phase specific); 75194-73527 [Arabidopsis thaliana] gb|AAL32874.1| putativ 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 1.041e-24
Putative C-terminus
sp_v3.0_unigene210296 SustainPine v3.0 1458
• AutoFact: Ribosomal L.8/L5e family protein [Arabidopsis thaliana] dbj|BAC43701.1| unknown protein [Arabidopsis thaliana] gb|AAO39958.1| At1g08850 [Arabidopsis thaliana] gb|AEE28358.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene210299 SustainPine v3.0 777
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 2.0e-24
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene210312 SustainPine v3.0 583
• AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 3.007e-14
C-terminus
sp_v3.0_unigene210316 SustainPine v3.0 815
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 2.0e-20
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21e, putative 4.045e-09
Complete
sp_v3.0_unigene210327 SustainPine v3.0 1043
• AutoFact: polyubiquitin [Pinus sylvestris] 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Ubiquitin, putative 4.51e-07
Putative N-terminus
sp_v3.0_unigene210331 SustainPine v3.0 690
• AutoFact: Ribosomal protein S7 n=1 Tax=Elaeis guineensis RepID=B3TLX3_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene210341 SustainPine v3.0 764
• AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Polyubiquitin 1.014e-07
Putative Complete
sp_v3.0_unigene210344 SustainPine v3.0 559
• AutoFact: Ribosomal_L41 domain containing protein 4.0e-10
unknown
sp_v3.0_unigene210346 SustainPine v3.0 473
• AutoFact: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=10 Tax=rosids RepID=METE_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cobalamin-independent methionine synthase 1.593e-23
Internal
sp_v3.0_unigene210348 SustainPine v3.0 669
• AutoFact: ribosomal S29 subunit [Arabidopsis thaliana] dbj|BAD43582.1| ribosomal S29 subunit [Arabidopsis thaliana] dbj|BAD43833.1| ribosomal S29 subunit [Arabidopsis thaliana] 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain