Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: structural constituent of ribosome

Term: GO:0003735  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21156 SustainPine v3.0 1002
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21266 SustainPine v3.0 963
• AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.23e-10
Complete
sp_v3.0_unigene21290 SustainPine v3.0 365
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Prunus armeniaca RepID=RS4_PRUAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 8.587e-21
Internal
sp_v3.0_unigene21312 SustainPine v3.0 808
• AutoFact: 40S ribosomal protein S11 [Chenopodium rubrum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 4.581e-28
Complete
sp_v3.0_unigene21322 SustainPine v3.0 768
• AutoFact: 60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 3.427e-10
Putative Complete
sp_v3.0_unigene21368 SustainPine v3.0 935
• AutoFact: 60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 2.131e-17
C-terminus
sp_v3.0_unigene21376 SustainPine v3.0 1087
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21378 SustainPine v3.0 1314
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21409 SustainPine v3.0 808
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 1.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21439 SustainPine v3.0 506
• AutoFact: 40S ribosomal protein S7-like protein n=1 Tax=Solanum tuberosum RepID=Q3HRX6_SOLTU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 6.999e-26
C-terminus
sp_v3.0_unigene21710 SustainPine v3.0 1190
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Bi-ubiquitin 1.79e-08
Putative Complete
sp_v3.0_unigene21733 SustainPine v3.0 1149
• AutoFact: Putative acid phosphatase (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVJ4_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative acid phosphatase 4.651e-29
Complete
sp_v3.0_unigene21734 SustainPine v3.0 574
• AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Bi-ubiquitin 1.764e-08
Putative Complete
sp_v3.0_unigene21736 SustainPine v3.0 393
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Polyubiquitin 9.247e-08
Putative C-terminus
sp_v3.0_unigene21738 SustainPine v3.0 1113
• AutoFact: Polyubiquitin-C n=586 Tax=cellular organisms RepID=UBC_HUMAN 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Bi-ubiquitin 1.599e-08
Putative Complete
sp_v3.0_unigene21739 SustainPine v3.0 723
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Ubiquitin, putative 4.339e-07
Putative Complete
sp_v3.0_unigene21741 SustainPine v3.0 829
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bi-ubiquitin 1.869e-08
Putative Complete
sp_v3.0_unigene21742 SustainPine v3.0 1020
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bi-ubiquitin 1.829e-08
Putative Complete
sp_v3.0_unigene21832 SustainPine v3.0 395
• AutoFact: PREDICTED: 60S ribosomal protein L30-like [Mus musculus] ref|XP_003085317.1| PREDICTED: 60S ribosomal protein L30-like [Mus musculus] gb|EDL26571.1| mCG10153 [Mus musculus] 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 1.354e-21
Complete
sp_v3.0_unigene21837 SustainPine v3.0 484
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Saccharomycetaceae RepID=RS21_ASHGO 1.0e-24
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 1.103e-14
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain