Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10520 SustainPine v3.0 563
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene10671 SustainPine v3.0 1305
• AutoFact: Ribosomal L18p/L5e family protein [Arabidopsis thaliana] dbj|BAB01882.1| unnamed protein product [Arabidopsis thaliana] gb|AAM63600.1| unknown [Arabidopsis thaliana] gb|AAN41334.1| unknown protein [Arabidopsis thaliana] dbj|BAH19862.1| AT3G20230 [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Structural constituent of ribosome, putative 1.605e-07
Complete
sp_v3.0_unigene10741 SustainPine v3.0 1110
• AutoFact: small subunit ribosomal protein S6 [Arabidopsis thaliana] dbj|BAB01802.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67031.1| unknown [Arabidopsis thaliana] dbj|BAC42712.1| unknown protein [Arabidopsis thaliana] gb|AAO50729.1| unknown protein [A 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10763 SustainPine v3.0 1330
• AutoFact: DUF1777 multi-domain protein 1.0e-14
unknown
sp_v3.0_unigene11017 SustainPine v3.0 1307
• AutoFact: Ribosomal protein L19 n=5 Tax=Picea sitchensis RepID=A9NRT3_PICSI 0.0
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
Complete
sp_v3.0_unigene11032 SustainPine v3.0 1128
• AutoFact: 50S ribosomal protein L29 [Arabidopsis thaliana] sp|Q9FJP3.1|RK29_ARATH RecName: Full=50S ribosomal protein L29, chloroplastic; AltName: Full=CL29; Flags: Precursor pdb|3BBO|Z Chain Z, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11266 SustainPine v3.0 1003
• AutoFact: pfam00403, HMA, Heavy-metal-associated domain 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene11397 SustainPine v3.0 929
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene11424 SustainPine v3.0 1785
• AutoFact: ribosomal protein L3 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11506 SustainPine v3.0 901
• AutoFact: 60S ribosomal protein L34, putative [Solanum demissum] gb|ABO92971.1| putative ribosomal protein L34e [Solanum tuberosum] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11528 SustainPine v3.0 1592
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11587 SustainPine v3.0 336
• AutoFact: Ribosomal protein rpl36a n=1 Tax=Arenicola marina RepID=A8UFM0_AREMA 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L44 9.67e-09
Putative Complete
sp_v3.0_unigene11593 SustainPine v3.0 1555
• AutoFact: Ribosomal protein L17 family protein [Arabidopsis thaliana] gb|AAM64301.1| ribsomal protein-like [Arabidopsis thaliana] gb|AAO24540.1| At5g09770 [Arabidopsis thaliana] dbj|BAF00072.1| ribsomal protein - like [Arabidopsis thaliana] gb|AED91444.1| Ribosomal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11677 SustainPine v3.0 1829
• AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin-like protein 5.595e-31
Internal
sp_v3.0_unigene11756 SustainPine v3.0 1306
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11761 SustainPine v3.0 1205
• AutoFact: ribosomal protein S1-like RNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB01847.1| unnamed protein product [Arabidopsis thaliana] gb|AAK83625.1| AT3g23700/MYM9_3 [Arabidopsis thaliana] gb|AAM98102.1| At3g23700/MYM9_3 [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene11768 SustainPine v3.0 1036
• AutoFact: 50S ribosomal protein L35 n=1 Tax=Picea sitchensis RepID=A9NKM1_PICSI 0.0
• FL-Next: sp=50S ribosomal protein L35; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L35 0.0
Complete
sp_v3.0_unigene11795 SustainPine v3.0 1290
• AutoFact: ENT domain containing protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Os03g0796400 protein 6.335e-06
Putative Complete
sp_v3.0_unigene11815 SustainPine v3.0 970
• AutoFact: Ribosomal protein S6 [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene11829 SustainPine v3.0 437
• AutoFact: 40S ribosomal protein S13, putative [Solanum demissum] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.281e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain