Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene206601 SustainPine v3.0 695
• AutoFact: 30S ribosomal protein S13 [Arabidopsis thaliana] sp|P42732.1|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] emb|CAA88028. 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S13, chloroplast 5.237e-09
Putative Complete
sp_v3.0_unigene206625 SustainPine v3.0 379
• AutoFact: Ubiquitin/ribosomal fusion protein n=1 Tax=Loa loa RepID=E1FY98_LOALO 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206686 SustainPine v3.0 423
• AutoFact: Ribosomal protein L21 n=8 Tax=Endopterygota RepID=D1LYQ2_MANSE 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 2.365e-10
C-terminus
sp_v3.0_unigene206729 SustainPine v3.0 559
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.54143e-44
Complete
sp_v3.0_unigene206754 SustainPine v3.0 378
• AutoFact: 40S ribosomal protein S15a-1 [Arabidopsis thaliana] ref|NP_200793.1| 40S ribosomal protein S15a-1 [Arabidopsis thaliana] ref|NP_973783.1| 40S ribosomal protein S15a-1 [Arabidopsis thaliana] ref|XP_002866354.1| RPS15A [Arabidopsis lyrata subsp. lyrata] ref 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206756 SustainPine v3.0 488
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 1.0e-30
• FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene206882 SustainPine v3.0 484
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206907 SustainPine v3.0 267
• AutoFact: ribosomal S29 subunit [Arabidopsis thaliana] dbj|BAD43582.1| ribosomal S29 subunit [Arabidopsis thaliana] dbj|BAD43833.1| ribosomal S29 subunit [Arabidopsis thaliana] 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S29 1.74e-23
Putative Complete
sp_v3.0_unigene206927 SustainPine v3.0 450
• AutoFact: PREDICTED: similar to ribosomal protein L9 [Strongylocentrotus purpuratus] ref|XP_001179587.1| PREDICTED: similar to ribosomal protein L9 [Strongylocentrotus purpuratus] 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 5.046e-22
C-terminus
sp_v3.0_unigene206930 SustainPine v3.0 386
• AutoFact: PREDICTED: similar to ribosomal protein L9 [Strongylocentrotus purpuratus] ref|XP_001179587.1| PREDICTED: similar to ribosomal protein L9 [Strongylocentrotus purpuratus] 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 5.046e-22
C-terminus
sp_v3.0_unigene206971 SustainPine v3.0 635
• AutoFact: 40S ribosomal protein S14 n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LU90_ARALL 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 2.091e-24
Complete
sp_v3.0_unigene206993 SustainPine v3.0 457
• AutoFact: 50S ribosomal protein L33 n=2 Tax=Picea sitchensis RepID=A9NLY6_PICSI 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L33 0.0
Putative Complete
sp_v3.0_unigene207021 SustainPine v3.0 544
• AutoFact: 40S ribosomal protein S23 n=32 Tax=leotiomyceta RepID=RS23_ASPFU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Complete
sp_v3.0_unigene207265 SustainPine v3.0 666
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 1.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene207287 SustainPine v3.0 656
• AutoFact: 60S ribosomal protein L12 n=3 Tax=Hypocreales RepID=E9EUF4_METAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene207292 SustainPine v3.0 702
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 1.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene207352 SustainPine v3.0 288
• AutoFact: 60S ribosomal protein L30-like protein n=6 Tax=Oryza sativa RepID=Q5QMX1_ORYSJ 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene207370 SustainPine v3.0 357
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-31
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.093e-16
Putative C-terminus
sp_v3.0_unigene207399 SustainPine v3.0 464
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 1.4013e-45
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 1.889e-16
Putative C-terminus
sp_v3.0_unigene207417 SustainPine v3.0 266
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-25
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 8.062e-13
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain