Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene203167 SustainPine v3.0 629
• AutoFact: 40S ribosomal protein S25 (Fragment) n=2 Tax=core eudicotyledons RepID=Q6VEV1_SOYBN 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 6.216e-12
Putative Complete
sp_v3.0_unigene203224 SustainPine v3.0 454
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Nematostella vectensis RepID=A7S405_NEMVE 9.99995e-41
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene203239 SustainPine v3.0 600
• AutoFact: Ubiquitin/ribosomal protein L40 fusion n=1 Tax=Bigelowiella natans RepID=Q7X739_BIGNA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin/ribosomal protein L40 fusion 0.0
Complete
sp_v3.0_unigene203248 SustainPine v3.0 544
• AutoFact: PREDICTED: similar to 60S ribosomal protein L27a n=1 Tax=Hydra magnipapillata RepID=UPI0001923E6C 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L27a 9.278e-16
Complete
sp_v3.0_unigene203265 SustainPine v3.0 549
• AutoFact: 60s ribosomal protein l9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6A8_PFIPI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.36e-18
N-terminus
sp_v3.0_unigene203290 SustainPine v3.0 468
• AutoFact: 60S ribosomal protein L5 (Fragment) n=1 Tax=Culex tarsalis RepID=B8RJE4_CULTA 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 3.831e-15
C-terminus
sp_v3.0_unigene203322 SustainPine v3.0 473
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Salmo salar RepID=C0H7K2_SALSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Complete
sp_v3.0_unigene203327 SustainPine v3.0 414
• AutoFact: PREDICTED: similar to ribosomal protein L30 [Tribolium castaneum] gb|EFA13254.1| hypothetical protein TcasGA2_TC001524 [Tribolium castaneum] 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein 0.0
Putative Complete
sp_v3.0_unigene203345 SustainPine v3.0 200
• AutoFact: Ribosomal protein L9, component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RVV0_OSTLU 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene203355 SustainPine v3.0 383
• AutoFact: Ribosomal protein S29 n=2 Tax=Branchiostoma RepID=Q86CT4_BRABE 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S29 5.401e-24
Complete
sp_v3.0_unigene203367 SustainPine v3.0 546
• AutoFact: Ribosomal protein L19 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NC86_PHYIT 1.0e-32
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
C-terminus
sp_v3.0_unigene203380 SustainPine v3.0 480
• AutoFact: Ribosomal protein S30 containing protein [Tetrahymena thermophila] pdb|2XZM|X Chain X, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 p 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene203389 SustainPine v3.0 537
• AutoFact: L27a n=1 Tax=Suberites domuncula RepID=Q4KTF7_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L27a 9.278e-16
Complete
sp_v3.0_unigene203391 SustainPine v3.0 445
• AutoFact: 60S ribosomal protein L36 n=4 Tax=Pleosporineae RepID=B2WFQ1_PYRTR 2.00386e-43
• FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L36 0.0
Complete
sp_v3.0_unigene203448 SustainPine v3.0 480
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.614e-27
Internal
sp_v3.0_unigene203549 SustainPine v3.0 579
• AutoFact: 40S ribosomal protein S24 n=2 Tax=Picea sitchensis RepID=A9NKN3_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Complete
sp_v3.0_unigene203554 SustainPine v3.0 468
• AutoFact: Probable 60S ribosomal protein L32 n=1 Tax=Sporisorium reilianum RepID=E6ZSU6_9BASI 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 3.593e-11
Complete
sp_v3.0_unigene203561 SustainPine v3.0 630
• AutoFact: S60 ribosomal protein L10 n=1 Tax=Dictyostelium fasciculatum RepID=F4PJ98_9MYCE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 5.534e-14
N-terminus
sp_v3.0_unigene203570 SustainPine v3.0 502
• AutoFact: Ribosomal protein L27 n=2 Tax=Phytophthora infestans RepID=D0N851_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27A 1.427e-12
Putative Complete
sp_v3.0_unigene203573 SustainPine v3.0 550
• AutoFact: Ribosomal protein L21 n=8 Tax=Endopterygota RepID=D1LYQ2_MANSE 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.471e-10
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain