Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene199187 SustainPine v3.0 290
• AutoFact: 40S ribosomal protein S28 [Botryotinia fuckeliana B05.10] gb|EDN17749.1| 40S ribosomal protein S28 [Botryotinia fuckeliana B05.10] 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S28 0.0
Putative Complete
sp_v3.0_unigene199362 SustainPine v3.0 339
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 4.641e-12
C-terminus
sp_v3.0_unigene199445 SustainPine v3.0 526
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.465e-26
Internal
sp_v3.0_unigene199651 SustainPine v3.0 319
• AutoFact: 60S ribosomal protein L10a-3 n=9 Tax=rosids RepID=R10A3_ARATH 1.0e-21
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.052e-33
C-terminus
sp_v3.0_unigene199671 SustainPine v3.0 163
• AutoFact: Ribosomal protein L10 n=4 Tax=Stylonychinae RepID=F5AMN8_STYLE 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 2.378e-10
N-terminus
sp_v3.0_unigene199686 SustainPine v3.0 363
• AutoFact: 40S ribosomal protein S4 [Dictyostelium discoideum AX4] sp|P51405.3|RS4_DICDI RecName: Full=40S ribosomal protein S4 gb|AAD04813.1| 40S ribosomal protein S4 [Dictyostelium discoideum] gb|EAL71050.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4] 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene199711 SustainPine v3.0 320
• AutoFact: Putative 40S ribosomal protein RPS23 n=1 Tax=Phoronis muelleri RepID=B2YI18_9BILA 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.718e-10
N-terminus
sp_v3.0_unigene199762 SustainPine v3.0 373
• AutoFact: 60S ribosomal protein L6 n=2 Tax=Neurospora crassa RepID=Q7SH22_NEUCR 3.00004e-41
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene199818 SustainPine v3.0 322
• AutoFact: putative QM protein [Lepeophtheirus salmonis] gb|ADD38795.1| 60S ribosomal protein L10 [Lepeophtheirus salmonis] 7.0e-40
• FL-Next: sp=60S ribosomal protein L10; Pinus taeda (Loblolly pine). 0.0
• Sma3: 60S ribosomal protein L10 8.854e-14
N-terminus
sp_v3.0_unigene199822 SustainPine v3.0 358
• AutoFact: 40S ribosomal protein S3, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5L603_9ALVE 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 9.473e-11
N-terminus
sp_v3.0_unigene199835 SustainPine v3.0 349
• AutoFact: [J] COG2007 Ribosomal protein S8E 3.0e-17
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene199855 SustainPine v3.0 361
• AutoFact: 40S ribosomal protein S3, putative n=3 Tax=rosids RepID=B9RK17_RICCO 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.183e-10
C-terminus
sp_v3.0_unigene199920 SustainPine v3.0 307
• AutoFact: PREDICTED: 60S ribosomal protein L7a [Apis mellifera] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.408e-08
Putative C-terminus
sp_v3.0_unigene199924 SustainPine v3.0 372
• AutoFact: Ribosomal protein L20 containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q235I3_TETTH 1.0e-27
• FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L20 5.834e-25
N-terminus
sp_v3.0_unigene199967 SustainPine v3.0 527
• AutoFact: Putative 60S ribosomal protein RPL8 (Fragment) n=1 Tax=Phoronis muelleri RepID=B2YI29_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 2.922e-08
N-terminus
sp_v3.0_unigene199985 SustainPine v3.0 235
• AutoFact: 40S ribosomal protein S12 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C3J8_9EUKA 6.0e-11
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 2.442e-08
N-terminus
sp_v3.0_unigene200026 SustainPine v3.0 451
• AutoFact: 82 kDa heat shock protein n=16 Tax=Bdelloidea RepID=B2L3I6_9BILA 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene200082 SustainPine v3.0 344
• AutoFact: Putative 60S ribosomal protein L6 n=1 Tax=Spadella cephaloptera RepID=A8E669_9BILA 8.0e-30
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 1.329e-11
Putative C-terminus
sp_v3.0_unigene200095 SustainPine v3.0 392
• AutoFact: UPI0002068BB3 related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0002068BB3 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 3.156e-19
Internal
sp_v3.0_unigene200145 SustainPine v3.0 465
• AutoFact: Ribosomal protein L7 (Fragment) n=2 Tax=Branchiostoma RepID=Q86LY5_BRALA 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 9.992e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain