Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene195678 SustainPine v3.0 399
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 3.153e-31
C-terminus
sp_v3.0_unigene196045 SustainPine v3.0 137
AutoFact: 60S ribosomal protein L12 n=1 Tax=Zea mays RepID=B6T1W9_MAIZE 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L12 4.048e-15
N-terminus
sp_v3.0_unigene196899 SustainPine v3.0 334
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 1.499e-13
Internal
sp_v3.0_unigene196964 SustainPine v3.0 335
AutoFact: Ribosomal protein L15 n=2 Tax=Chlamydomonadales RepID=A8I982_CHLRE 3.0e-19
FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L15 0.0
C-terminus
sp_v3.0_unigene197250 SustainPine v3.0 139
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.107e-17
Putative C-terminus
sp_v3.0_unigene198392 SustainPine v3.0 524
AutoFact: 60s ribosomal protein l21-a [Coprinopsis cinerea okayama7#130] gb|EAU92440.1| 60s ribosomal protein l21-a [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 3.591e-10
Putative Complete
sp_v3.0_unigene198442 SustainPine v3.0 455
AutoFact: 60S ribosomal protein L7 n=4 Tax=Pleosporineae RepID=B2WF45_PYRTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7 2.196e-11
C-terminus
sp_v3.0_unigene198480 SustainPine v3.0 286
AutoFact: 60S ribosomal protein L23, putative n=6 Tax=Plasmodium RepID=A5K7W5_PLAVS 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23 2.274e-11
N-terminus
sp_v3.0_unigene198488 SustainPine v3.0 468
AutoFact: 60S ribosomal protein L21 n=4 Tax=Pucciniales RepID=E3K971_PUCGT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 3.182e-10
Putative Complete
sp_v3.0_unigene198494 SustainPine v3.0 407
AutoFact: 60S ribosomal protein L36 n=2 Tax=Cryptococcus neoformans var. neoformans RepID=Q5KEE1_CRYNJ 3.0e-17
FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L36 2.9e-15
Complete
sp_v3.0_unigene198514 SustainPine v3.0 457
AutoFact: 60S ribosomal protein L37a n=7 Tax=leotiomyceta RepID=Q4WZH8_ASPFU 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L37a 1.156e-10
Complete
sp_v3.0_unigene198541 SustainPine v3.0 559
AutoFact: 60s ribosomal protein l11 [Cryptococcus neoformans var. neoformans JEC21] ref|XP_773228.1| hypothetical protein CNBJ0070 [Cryptococcus neoformans var. neoformans B-3501A] ref|XP_003196328.1| 60s ribosomal protein L11 [Cryptococcus gattii WM276] gb|EAL1858 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L11 2.963e-11
Putative Complete
sp_v3.0_unigene198581 SustainPine v3.0 397
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.4013e-45
C-terminus
sp_v3.0_unigene198650 SustainPine v3.0 523
AutoFact: Ribosomal protein L37 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WAU5_PYRTR 1.99965e-42
FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene198702 SustainPine v3.0 449
AutoFact: 60S ribosomal protein L36 n=2 Tax=Chlamydomonadales RepID=D8U456_VOLCA 2.0e-24
FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L36 0.0
Complete
sp_v3.0_unigene198738 SustainPine v3.0 278
AutoFact: ACYPI006857 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WU26_ACYPI 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 8.216e-39
N-terminus
sp_v3.0_unigene198816 SustainPine v3.0 494
AutoFact: 40S ribosomal protein S26 n=4 Tax=Agaricomycetes RepID=RS26_SCHCO 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S26 2.114e-18
Complete
sp_v3.0_unigene198830 SustainPine v3.0 400
AutoFact: 60S ribosomal protein L6 n=2 Tax=Phasianidae RepID=Q8UWG7_CHICK 1.0e-15
FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L6 9.351e-08
N-terminus
sp_v3.0_unigene198912 SustainPine v3.0 470
AutoFact: Ribosomal protein L19 n=1 Tax=Naegleria gruberi RepID=D2VC39_NAEGR 3.0e-36
FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L19 0.0
N-terminus
sp_v3.0_unigene198931 SustainPine v3.0 366
AutoFact: 40S ribosomal protein S12 n=5 Tax=Agaricomycetes RepID=B8PIM8_POSPM 1.4013e-45
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain