Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21881 SustainPine v3.0 665
• AutoFact: Ribosomal protein L12 n=1 Tax=Anthopleura elegantissima RepID=Q2LGN5_ANTEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene21884 SustainPine v3.0 562
• AutoFact: 40S ribosomal protein S12 n=1 Tax=Novocrania anomala RepID=B2YHX1_9BILA 7.00005e-41
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 1.45735e-43
Complete
sp_v3.0_unigene21899 SustainPine v3.0 717
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Monosiga brevicollis RepID=A9UQ35_MONBE 6.0e-35
• FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: 60S ribosomal protein L6 1.102e-39
Complete
sp_v3.0_unigene21903 SustainPine v3.0 562
• AutoFact: Cyc07-like protein n=1 Tax=Solanum tuberosum RepID=Q2XPW5_SOLTU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 1.032e-17
Putative Complete
sp_v3.0_unigene21913 SustainPine v3.0 474
• AutoFact: 60S ribosomal protein L12 n=3 Tax=Caenorhabditis RepID=RL12_CAEEL 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
N-terminus
sp_v3.0_unigene21941 SustainPine v3.0 647
• AutoFact: Ribosomal protein S3 n=4 Tax=Pinaceae RepID=D2DWH7_9CONI 5.0e-26
• FL-Next: tr=Ribosomal protein S3; Abies holophylla (Neddle fir) (Manchurian fir). Mitochondrion. 0.0
• Sma3: Ribosomal protein S3 0.0
Putative N-terminus
sp_v3.0_unigene21987 SustainPine v3.0 1181
• AutoFact: DUF868 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22001 SustainPine v3.0 359
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene22047 SustainPine v3.0 328
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 2.867e-12
C-terminus
sp_v3.0_unigene22063 SustainPine v3.0 1019
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene22065 SustainPine v3.0 681
• AutoFact: Acid phosphatase (Fragment) n=1 Tax=Picea abies RepID=B2KZJ5_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative acid phosphatase 1.503e-22
C-terminus
sp_v3.0_unigene22077 SustainPine v3.0 524
• AutoFact: 60S ribosomal protein L28, putative n=1 Tax=Ricinus communis RepID=B9RKC5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L28 2.235e-12
N-terminus
sp_v3.0_unigene22091 SustainPine v3.0 595
• AutoFact: Ribosomal protein L2 n=1 Tax=Cycas taitungensis RepID=B0BLF2_CYCTA 3.9937e-43
• FL-Next: sp=50S ribosomal protein L2, chloroplastic; Taiwania cryptomerioides. Plastid; Chloroplast. 0.0
• Sma3: Ribosomal protein L2 7.498e-31
N-terminus
sp_v3.0_unigene22150 SustainPine v3.0 778
• AutoFact: polyubiquitin [Triticum aestivum] 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Bi-ubiquitin 1.882e-08
Putative Complete
sp_v3.0_unigene22166 SustainPine v3.0 430
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758 gb|AEE86306.1| pentatricopeptide repeat-containing 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 8.004e-09
C-terminus
sp_v3.0_unigene22205 SustainPine v3.0 351
• AutoFact: 40S ribosomal protein S21 n=3 Tax=Pleosporineae RepID=B2WKW2_PYRTR 3.00004e-41
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 7.052e-15
Complete
sp_v3.0_unigene22229 SustainPine v3.0 505
• AutoFact: QM-like protein n=5 Tax=Tracheophyta RepID=Q9FUN3_ELAGV 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 3.02e-10
Putative N-terminus
sp_v3.0_unigene22239 SustainPine v3.0 432
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 7.101e-16
C-terminus
sp_v3.0_unigene22282 SustainPine v3.0 196
• AutoFact: 60S ribosomal protein L23 n=41 Tax=Embryophyta RepID=RL23_ARATH 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23, putative 9.505e-09
N-terminus
sp_v3.0_unigene22407 SustainPine v3.0 928
• AutoFact: 40S ribosomal protein S12 n=4 Tax=Picea sitchensis RepID=A9NQ79_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain