Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21409 SustainPine v3.0 808
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 1.0e-38
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21439 SustainPine v3.0 506
• AutoFact: 40S ribosomal protein S7-like protein n=1 Tax=Solanum tuberosum RepID=Q3HRX6_SOLTU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 6.999e-26
C-terminus
sp_v3.0_unigene21710 SustainPine v3.0 1190
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Bi-ubiquitin 1.79e-08
Putative Complete
sp_v3.0_unigene21733 SustainPine v3.0 1149
• AutoFact: Putative acid phosphatase (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVJ4_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative acid phosphatase 4.651e-29
Complete
sp_v3.0_unigene21734 SustainPine v3.0 574
• AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Bi-ubiquitin 1.764e-08
Putative Complete
sp_v3.0_unigene21736 SustainPine v3.0 393
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Polyubiquitin 9.247e-08
Putative C-terminus
sp_v3.0_unigene21738 SustainPine v3.0 1113
• AutoFact: Polyubiquitin-C n=586 Tax=cellular organisms RepID=UBC_HUMAN 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Bi-ubiquitin 1.599e-08
Putative Complete
sp_v3.0_unigene21739 SustainPine v3.0 723
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Ubiquitin, putative 4.339e-07
Putative Complete
sp_v3.0_unigene21741 SustainPine v3.0 829
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bi-ubiquitin 1.869e-08
Putative Complete
sp_v3.0_unigene21742 SustainPine v3.0 1020
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bi-ubiquitin 1.829e-08
Putative Complete
sp_v3.0_unigene21832 SustainPine v3.0 395
• AutoFact: PREDICTED: 60S ribosomal protein L30-like [Mus musculus] ref|XP_003085317.1| PREDICTED: 60S ribosomal protein L30-like [Mus musculus] gb|EDL26571.1| mCG10153 [Mus musculus] 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 1.354e-21
Complete
sp_v3.0_unigene21837 SustainPine v3.0 484
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Saccharomycetaceae RepID=RS21_ASHGO 1.0e-24
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 1.103e-14
Complete
sp_v3.0_unigene21841 SustainPine v3.0 477
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Lineus viridis RepID=B0Z9M8_9BILA 0.0
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene21842 SustainPine v3.0 603
• AutoFact: 40S ribosomal protein S13 n=4 Tax=Schizosaccharomyces RepID=RS13_SCHPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.85e-14
Complete
sp_v3.0_unigene21845 SustainPine v3.0 565
• AutoFact: 60S ribosomal protein L31 n=1 Tax=Cyanophora paradoxa RepID=RL31_CYAPA 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L31 1.4013e-44
Putative Complete
sp_v3.0_unigene21846 SustainPine v3.0 457
• AutoFact: 60S ribosomal protein L2 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q9LLS6_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
C-terminus
sp_v3.0_unigene21848 SustainPine v3.0 784
• AutoFact: 40S ribosomal protein S3 n=33 Tax=Eukaryota RepID=RS3_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.23e-10
Complete
sp_v3.0_unigene21853 SustainPine v3.0 479
• AutoFact: 60S ribosomal protein L36 n=2 Tax=Sclerotiniaceae RepID=A6S5A8_BOTFB 9.0e-39
• FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L36 1.543e-27
Complete
sp_v3.0_unigene21870 SustainPine v3.0 391
• AutoFact: Ribosomal protein L5 (Fragment) n=1 Tax=Branchiostoma lanceolatum RepID=Q86LY6_BRALA 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene21875 SustainPine v3.0 711
• AutoFact: S60 ribosomal protein L10 n=1 Tax=Dictyostelium fasciculatum RepID=F4PJ98_9MYCE 0.0
• FL-Next: sp=60S ribosomal protein L10; Solanum melongena (Eggplant) (Aubergine). 0.0
• Sma3: 60S ribosomal protein L10 5.534e-14
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain