Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17993 SustainPine v3.0 1246
• AutoFact: 30S ribosomal protein S9, chloroplastic n=5 Tax=Arabidopsis RepID=RR9_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18042 SustainPine v3.0 906
• AutoFact: 60S ribosomal protein n=1 Tax=Ajellomyces capsulatus H88 RepID=F0USJ3_AJEC8 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 2.452e-08
Complete
sp_v3.0_unigene18060 SustainPine v3.0 868
• AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18105 SustainPine v3.0 1486
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 8.661e-19
Complete
sp_v3.0_unigene18154 SustainPine v3.0 1378
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18254 SustainPine v3.0 1623
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SWE4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L15 1.243e-09
Complete
sp_v3.0_unigene18292 SustainPine v3.0 1096
• AutoFact: 50S ribosomal protein L11 [Arabidopsis thaliana] sp|Q9MAP3.1|RK11_ARATH RecName: Full=50S ribosomal protein L11, chloroplastic; AltName: Full=CL11; Flags: Precursor gb|AAF31280.1|AC006424_9 Very similar to Spinacia oleracea 50S ribosomal p> [Arabidopsis t 5.0e-37
• FL-Next: sp=50S ribosomal protein L11, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 50S ribosomal protein L11, chloroplastic 2.887e-40
Complete
sp_v3.0_unigene18372 SustainPine v3.0 501
• AutoFact: 60S ribosomal protein L24, putative n=2 Tax=fabids RepID=B9SRL5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 2.651e-07
N-terminus
sp_v3.0_unigene18398 SustainPine v3.0 663
• AutoFact: Ubiquitin [Medicago truncatula] 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Bi-ubiquitin 1.777e-08
Complete
sp_v3.0_unigene18431 SustainPine v3.0 1621
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 8.661e-19
Complete
sp_v3.0_unigene18449 SustainPine v3.0 938
• AutoFact: 50S ribosomal protein L33 n=2 Tax=Picea sitchensis RepID=A9NLY6_PICSI 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L33 0.0
Complete
sp_v3.0_unigene18460 SustainPine v3.0 1148
• AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 1.0e-33
• FL-Next: sp=40S ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S27 0.0
Complete
sp_v3.0_unigene18464 SustainPine v3.0 925
• AutoFact: 30S ribosomal protein S16 n=1 Tax=Solanum lycopersicum RepID=B3IWG3_SOLLC 9.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18520 SustainPine v3.0 907
• AutoFact: 60S ribosomal protein L30 n=1 Tax=Wolffia arrhiza RepID=D1MI90_WOLAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18632 SustainPine v3.0 709
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 3.0e-37
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Ubiquitin, putative 1.219e-10
Putative Complete
sp_v3.0_unigene18659 SustainPine v3.0 1201
• AutoFact: Polyubiquitin-C n=586 Tax=cellular organisms RepID=UBC_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bi-ubiquitin 1.777e-08
Putative Complete
sp_v3.0_unigene18664 SustainPine v3.0 857
• AutoFact: large subunit ribosomal protein L13 [Arabidopsis thaliana] ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana] gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana] dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73714. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ribosomal protein I 5.028e-09
Putative Complete
sp_v3.0_unigene18677 SustainPine v3.0 790
• AutoFact: Polyubiquitin n=2 Tax=Chlorophyta RepID=D8U995_VOLCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin, putative 4.863e-07
Complete
sp_v3.0_unigene18760 SustainPine v3.0 435
• AutoFact: Cysteine protease inhibitor (Fragment) n=2 Tax=Pseudotsuga RepID=C6FDD3_PSEMZ 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cystatin 3.091e-10
Putative Complete
sp_v3.0_unigene18809 SustainPine v3.0 432
• Sma3: 60S ribosomal protein L12 4.249e-08
putative_coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain