Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene210216 SustainPine v3.0 847
• AutoFact: Phosphofructokinase, putative n=1 Tax=Ricinus communis RepID=B9RKE5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphofructokinase, putative 1.247e-16
N-terminus
sp_v3.0_unigene210219 SustainPine v3.0 599
• AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene210220 SustainPine v3.0 838
• AutoFact: CLP-like protein 3 [Arabidopsis thaliana] ref|NP_974220.1| CLP-like protein 3 [Arabidopsis thaliana] gb|AAF04897.1|AC011437_12 unknown protein [Arabidopsis thaliana] gb|AAL32944.1| Unknown protein [Arabidopsis thaliana] gb|AAM91151.1| unknown protein [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene210227 SustainPine v3.0 654
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 7.615e-12
Internal
sp_v3.0_unigene210230 SustainPine v3.0 319
• AutoFact: NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I9_PINTA 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene210235 SustainPine v3.0 363
• AutoFact: RING-H2 finger protein ATL2 n=2 Tax=Arabidopsis RepID=ATL2_ARATH 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene210241 SustainPine v3.0 599
• AutoFact: subtilisin-like serine protease [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Subtilisin-like protease 1.33123e-43
Internal
sp_v3.0_unigene210249 SustainPine v3.0 840
• AutoFact: Pollen allergen CJP38 n=1 Tax=Cryptomeria japonica RepID=Q588B8_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-1,3-glucanase 0.0
C-terminus
sp_v3.0_unigene210262 SustainPine v3.0 791
• AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
• FL-Next: Isoform Short of U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 0.0
• Sma3: U1 snRNP 2.076e-09
Putative C-terminus
sp_v3.0_unigene210263 SustainPine v3.0 666
• AutoFact: CC-NBS-LRR resistance-like protein n=5 Tax=Pinaceae RepID=Q1L6F3_PINLA 0.0
• FL-Next: tr=CC-NBS-LRR resistance-like protein; Pinus lambertiana (Sugar pine). 0.0
• Sma3: Putative CC-NBS-LRR protein 0.0
Internal
sp_v3.0_unigene210272 SustainPine v3.0 246
• AutoFact: 40S ribosomal protein S3a-1 [Arabidopsis thaliana] sp|Q9CAV0.3|RS3A1_ARATH RecName: Full=40S ribosomal protein S3a-1 gb|AAG51414.1|AC009465_14 putative 40S ribosomal protein S3A (S phase specific); 75194-73527 [Arabidopsis thaliana] gb|AAL32874.1| putativ 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 1.041e-24
Putative C-terminus
sp_v3.0_unigene210276 SustainPine v3.0 893
• AutoFact: Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|AAX95779.1| Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|ABA91741.1| Adaptin N terminal region family protein, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 1.042e-12
Internal
sp_v3.0_unigene210301 SustainPine v3.0 498
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 2.0e-25
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
N-terminus
sp_v3.0_unigene210311 SustainPine v3.0 538
• AutoFact: Cytosolic ascorbate peroxidase n=4 Tax=rosids RepID=A9UFX7_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ascorbate peroxidase 0.0
N-terminus
sp_v3.0_unigene210352 SustainPine v3.0 2413
• AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene210362 SustainPine v3.0 1611
• AutoFact: aspartyl protease-like protein [Arabidopsis thaliana] gb|AAP21262.1| At2g03200 [Arabidopsis thaliana] dbj|BAE99983.1| putative chloroplast nucleoid DNA binding protein [Arabidopsis thaliana] gb|AEC05674.1| aspartyl protease-like protein [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aspartic proteinase nepenthesin-1, putative 1.011e-10
Putative Complete
sp_v3.0_unigene210372 SustainPine v3.0 254
• AutoFact: Triosephosphate isomerase n=1 Tax=Picea sitchensis RepID=A9NRN6_PICSI 3.0e-22
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
Internal
sp_v3.0_unigene210380 SustainPine v3.0 333
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 6.544e-06
Internal
sp_v3.0_unigene210426 SustainPine v3.0 293
• AutoFact: DSBA oxidoreductase family protein [Arabidopsis thaliana] dbj|BAB08647.1| frnE protein-like [Arabidopsis thaliana] gb|AAO22793.1| putative frnE protein [Arabidopsis thaliana] gb|AAO42447.1| putative frnE protein [Arabidopsis thaliana] gb|AED94373.1| DSBA 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene210429 SustainPine v3.0 498
• AutoFact: VTC2 n=3 Tax=Andropogoneae RepID=B6TMF8_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: VTC2-like protein 7.361e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain