Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene209729 SustainPine v3.0 496
AutoFact: putative MADS box transcription factor PrMADS9 [Pinus radiata] 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box transcription factor 5.914e-14
N-terminus
sp_v3.0_unigene209749 SustainPine v3.0 315
AutoFact: Pollen allergen CJP38 n=1 Tax=Cryptomeria japonica RepID=Q588B8_CRYJA 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-1,3-glucanase 0.0
Putative C-terminus
sp_v3.0_unigene209756 SustainPine v3.0 194
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 6.0e-11
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene209829 SustainPine v3.0 543
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 6.0e-25
FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 6.252e-28
N-terminus
sp_v3.0_unigene209835 SustainPine v3.0 543
AutoFact: brassinosteroid-responsive RING-H2 [Arabidopsis thaliana] ref|XP_002878382.1| brassinosteroid-responsive ring-H2 [Arabidopsis lyrata subsp. lyrata] gb|AAD27870.1|AF134155_1 BRH1 RING finger protein [Arabidopsis thaliana] emb|CAB71076.1| RING finger protei 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene209861 SustainPine v3.0 782
AutoFact: DAG protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SE52_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DAG protein 2.739e-24
N-terminus
sp_v3.0_unigene209885 SustainPine v3.0 262
AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 2.0e-28
FL-Next: sp=Coatomer subunit gamma; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit gamma 1.374e-08
Internal
sp_v3.0_unigene209889 SustainPine v3.0 384
AutoFact: Serine/threonine-protein kinase AtPK7 n=3 Tax=Arabidopsis RepID=KPK7_ARATH 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 1.405e-13
N-terminus
sp_v3.0_unigene209905 SustainPine v3.0 282
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TIR/P-loop/LRR 4.386e-06
Putative C-terminus
sp_v3.0_unigene209937 SustainPine v3.0 190
AutoFact: LRX2, putative n=1 Tax=Ricinus communis RepID=B9RL73_RICCO 2.0e-17
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Extensin-like protein 6.653e-09
Internal
sp_v3.0_unigene210024 SustainPine v3.0 251
AutoFact: pfam12799, LRR_4, Leucine Rich repeats (2 copies) 2.0e-05
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene210066 SustainPine v3.0 494
AutoFact: Ca2+/H+-exchanging protein n=1 Tax=Hordeum vulgare subsp. vulgare RepID=A4GWV0_HORVD 6.0e-30
FL-Next: Isoform 2 of Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a 0.0
Sma3: Ca2+ antiporter/cation exchanger 8.07e-21
C-terminus
sp_v3.0_unigene210116 SustainPine v3.0 417
AutoFact: Ethylene-insensitive 3d n=2 Tax=Populus trichocarpa RepID=B9HK87_POPTR 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ethylene signal transcription factor 1.312e-15
N-terminus
sp_v3.0_unigene210126 SustainPine v3.0 285
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 5.0e-11
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pre-mRNA-processing protein PRP40, putative 6.823e-06
Putative C-terminus
sp_v3.0_unigene210135 SustainPine v3.0 388
AutoFact: MYB transcription factor MYB92 [Glycine max] 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB1 5.923e-11
Putative N-terminus
sp_v3.0_unigene210146 SustainPine v3.0 709
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 3.0e-18
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Condensin complex component 9.494e-08
Putative N-terminus
sp_v3.0_unigene210165 SustainPine v3.0 421
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 0.0
FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Actin 2.274e-22
Complete
sp_v3.0_unigene210177 SustainPine v3.0 654
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene210181 SustainPine v3.0 452
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.39e-12
Internal
sp_v3.0_unigene210213 SustainPine v3.0 708
AutoFact: aspartyl protease-like protein [Arabidopsis thaliana] gb|AAG50814.1|AC079281_16 hypothetical protein [Arabidopsis thaliana] gb|AAM20575.1| unknown protein [Arabidopsis thaliana] gb|AAN15613.1| unknown protein [Arabidopsis thaliana] dbj|BAF00436.1| hypothe 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aspartic proteinase nepenthesin-1, putative 8.89e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain