Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene207786 SustainPine v3.0 550
• AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene207787 SustainPine v3.0 549
• AutoFact: Putative DEAD-box protein abstrakt n=1 Tax=Trifolium pratense RepID=Q2PEY4_TRIPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 9.916e-12
Internal
sp_v3.0_unigene207796 SustainPine v3.0 531
• AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.367e-06
Internal
sp_v3.0_unigene207797 SustainPine v3.0 528
• AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
• FL-Next: tr=Actin 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Actin 2.031e-37
Putative C-terminus
sp_v3.0_unigene207816 SustainPine v3.0 491
• AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 0.0
• FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
• Sma3: Actin 1.792e-09
N-terminus
sp_v3.0_unigene207835 SustainPine v3.0 471
• AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] 7.0e-10
• FL-Next: sp=Probable LRR receptor-like serine/threonine-protein kinase At2g24230; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene207863 SustainPine v3.0 438
• AutoFact: zinc transporter, putative [Asparagus officinalis] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative zinc transporter 7.889e-17
Internal
sp_v3.0_unigene207892 SustainPine v3.0 397
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 3.0e-15
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene207929 SustainPine v3.0 348
• AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AAG28814.1|AC079374_17 unknown protein [Arabidopsis thaliana] gb|AAL08297.1| At1g25320/F4F7_17 [Arabidopsis thaliana] gb|AAQ65094.1| At1g25320/F4F7_17 [Arabidopsis thaliana] gb|ACN5 1.0e-31
• FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.201e-12
Internal
sp_v3.0_unigene207952 SustainPine v3.0 324
• AutoFact: Myb transcription factor n=1 Tax=Solenostemon scutellarioides RepID=A5A381_SOLSC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Myb protein 2.916e-09
Putative N-terminus
sp_v3.0_unigene208025 SustainPine v3.0 245
• AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 3.0e-16
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene208031 SustainPine v3.0 238
• AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene208055 SustainPine v3.0 218
• AutoFact: 40S ribosomal protein S3a n=8 Tax=fabids RepID=RS3A_CICAR 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 6.1e-21
C-terminus
sp_v3.0_unigene208095 SustainPine v3.0 180
• AutoFact: RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07 dbj|BAA89498.1| cyc07 [Daucus carota] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 3.897e-25
Internal
sp_v3.0_unigene208155 SustainPine v3.0 132
• AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene208166 SustainPine v3.0 123
• AutoFact: ORF MSV144 putative ubiquitin, similar to Neurospora crassa GB:U01220 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVU8_MSEPV 1.0e-11
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene208228 SustainPine v3.0 354
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I8_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene208272 SustainPine v3.0 596
• AutoFact: Histone deacetylase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U4N6_VITVI 0.0
• FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Histone deacetylase 3.96708e-42
Internal
sp_v3.0_unigene208319 SustainPine v3.0 481
• AutoFact: Structural maintenance of chromosomes (SMC)-like protein n=2 Tax=Arabidopsis RepID=Q9M1T3_ARATH 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Condensin complex component 5.689e-08
Internal
sp_v3.0_unigene208323 SustainPine v3.0 437
• AutoFact: GRP multi-domain protein 4.0e-12
• Sma3: Putative glycine-rich cell wall structural protein 7.164e-11
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain